CIRCA

NEWS (6/9/2014): We added two new datasets: "Mouse Macrophages" and "Mouse Heart LD"

(Examples 1451371_at 1422470_at gnf1m00037_a_at or Arntl or kinase inhibitor )
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Experiment help page
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8078272 Data
Experiment Human U2 OS Hughes 2009 (Affymetrix)

Probeset 8078272

Links Wikipedia HomoloGene

Symbol NR1D2

Unigene Hs.37288

RefSeq Protein None

RefSeq DNA NM_005126
NM_001145425

Description nuclear receptor subfamily 1, group D, member 2
Experiment help page p-Value q-Value period phase
JTK 1.52e-15 5.06e-11 24.0 6.0
Lomb Scargle 1.44e-07 0.00239738 23.525 6.24
DeLichtenberg 0.0346 0.320734 24.0 NA
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1424108_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_001113560
RNAseq_NM_025374

Probeset 1424108_at

Links Wikipedia HomoloGene

Symbol Glo1

Unigene Mm.261984

RefSeq Protein NP_001107032   NP_079650

RefSeq DNA NM_001113560
NM_025374

Description glyoxalase 1
Experiment help page p-Value q-Value period phase
JTK 1.67e-13 5.55e-11 26.0 1.5
Lomb Scargle 1.13e-07 9.57407e-05 25.794 10.96
DeLichtenberg 0.3276 1.0 24.0 NA
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1435797_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_027652

Probeset 1435797_at

Links Wikipedia HomoloGene

Symbol Ept1

Unigene Mm.168854

RefSeq Protein NP_081928

RefSeq DNA NM_027652

Description ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)
Experiment help page p-Value q-Value period phase
JTK 1.67e-13 5.55e-11 25.0 2.0
Lomb Scargle 5.05e-07 0.000177938 24.836 9.42
DeLichtenberg 0.0265 0.568452 24.0 NA
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1426461_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_139297

Probeset 1426461_at

Links Wikipedia HomoloGene

Symbol Ugp2

Unigene Mm.28877

RefSeq Protein NP_647458

RefSeq DNA NM_139297

Description UDP-glucose pyrophosphorylase 2
Experiment help page p-Value q-Value period phase
JTK 1.67e-13 5.55e-11 26.0 10.5
Lomb Scargle 5.66e-07 0.000182337 25.306 17.21
DeLichtenberg 0.1491 0.893867 24.0 NA
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1417883_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_010361

Probeset 1417883_at

Links Wikipedia HomoloGene

Symbol Gstt2

Unigene Mm.24118

RefSeq Protein NP_034491

RefSeq DNA NM_010361

Description glutathione S-transferase, theta 2
Experiment help page p-Value q-Value period phase
JTK 1.67e-13 5.55e-11 25.0 13.0
Lomb Scargle 1.1e-06 0.0002653 24.383 18.52
DeLichtenberg 0.0684 0.63311 24.0 NA
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1415806_at Data
Experiment Mouse Pituitary 48 hour Hughes 2009 (Affymetrix)

Probeset 1415806_at

Links Wikipedia HomoloGene

Symbol Plat

Unigene Mm.154660

RefSeq Protein NP_032898

RefSeq DNA NM_008872

Description plasminogen activator, tissue
Experiment help page p-Value q-Value period phase
JTK 1.19e-14 6.7e-11 25.0 2.0
Lomb Scargle 4.09e-07 0.00241854 24.383 10.59
DeLichtenberg 0.2396 1.0 24.0 NA
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1421037_at Data
Experiment Mouse Pituitary 48 hour Hughes 2009 (Affymetrix)

Probeset 1421037_at

Links Wikipedia HomoloGene

Symbol Npas2

Unigene Mm.2380

RefSeq Protein NP_032745

RefSeq DNA NM_008719

Description neuronal PAS domain protein 2
Experiment help page p-Value q-Value period phase
JTK 1.36e-14 6.79e-11 25.0 1.0
Lomb Scargle 1.02e-06 0.0046003 23.946 7.81
DeLichtenberg 0.0 0.0 24.0 NA
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1417429_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_010231

Probeset 1417429_at

Links Wikipedia HomoloGene

Symbol Fmo1

Unigene Mm.976

RefSeq Protein NP_034361

RefSeq DNA NM_010231

Description flavin containing monooxygenase 1
Experiment help page p-Value q-Value period phase
JTK 2.11e-13 6.89e-11 26.0 19.0
Lomb Scargle 1.65e-07 0.000118838 25.306 0.62
DeLichtenberg 0.4602 1.0 24.0 NA
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1426037_a_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_011267

Probeset 1426037_a_at

Links Wikipedia HomoloGene

Symbol Rgs16

Unigene Mm.181709

RefSeq Protein NP_035397

RefSeq DNA NM_011267

Description regulator of G-protein signaling 16
Experiment help page p-Value q-Value period phase
JTK 2.11e-13 6.89e-11 24.0 9.75
Lomb Scargle 0.0035 0.0505293 22.725 17.18
DeLichtenberg 0.0 0.0 24.0 NA
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1422230_s_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_007812
RNAseq_NM_009997

Probeset 1422230_s_at

Links Wikipedia HomoloGene

Symbol Cyp2a4
Cyp2a5

Unigene Mm.154643

RefSeq Protein NP_031838   NP_034127

RefSeq DNA NM_007812
NM_009997

Description cytochrome P450, family 2, subfamily a, polypeptide 4 /// cytochrome P450, family 2, subfamily a, polypeptide 5
Experiment help page p-Value q-Value period phase
JTK 2.65e-13 8.54e-11 23.5 14.0
Lomb Scargle 1.92e-07 0.000120269 23.118 21.03
DeLichtenberg 0.0309 0.568452 24.0 NA
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1433658_x_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_021567

Probeset 1433658_x_at

Links Wikipedia HomoloGene

Symbol Pcbp4

Unigene Mm.286394

RefSeq Protein NP_067542

RefSeq DNA NM_021567

Description poly(rC) binding protein 4
Experiment help page p-Value q-Value period phase
JTK 2.65e-13 8.54e-11 25.0 7.0
Lomb Scargle 2.84e-06 0.000455825 24.383 13.49
DeLichtenberg 0.0224 0.568452 24.0 NA
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1429399_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_026301

Probeset 1429399_at

Links Wikipedia HomoloGene

Symbol Rnf125

Unigene Mm.45980

RefSeq Protein NP_080577

RefSeq DNA NM_026301

Description ring finger protein 125
Experiment help page p-Value q-Value period phase
JTK 3.33e-13 1.01e-10 25.0 0.0
Lomb Scargle 1.21e-07 9.57407e-05 24.836 6.76
DeLichtenberg 0.0012 0.26926 24.0 NA
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1418444_a_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_019580

Probeset 1418444_a_at

Links Wikipedia HomoloGene

Symbol Gde1

Unigene Mm.273142

RefSeq Protein NP_062526

RefSeq DNA NM_019580

Description glycerophosphodiester phosphodiesterase 1
Experiment help page p-Value q-Value period phase
JTK 3.33e-13 1.01e-10 24.0 15.5
Lomb Scargle 1.98e-07 0.000122247 24.383 23.03
DeLichtenberg 0.0405 0.57458 24.0 NA
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1436590_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_177741

Probeset 1436590_at

Links Wikipedia HomoloGene

Symbol Ppp1r3b

Unigene Mm.247126

RefSeq Protein NP_808409

RefSeq DNA NM_177741

Description protein phosphatase 1, regulatory (inhibitor) subunit 3B
Experiment help page p-Value q-Value period phase
JTK 3.33e-13 1.01e-10 24.0 18.5
Lomb Scargle 2.52e-07 0.000130178 23.525 0.3
DeLichtenberg 0.001 0.249177 24.0 NA
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1448450_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_001033966
RNAseq_NM_016895

Probeset 1448450_at

Links Wikipedia HomoloGene

Symbol Ak2

Unigene Mm.29460

RefSeq Protein NP_001029138   NP_058591

RefSeq DNA NM_001033966
NM_016895

Description adenylate kinase 2
Experiment help page p-Value q-Value period phase
JTK 3.33e-13 1.01e-10 24.0 12.5
Lomb Scargle 3.29e-07 0.000149881 23.525 18.22
DeLichtenberg 0.0985 0.729706 24.0 NA
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1448506_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_007618

Probeset 1448506_at

Links Wikipedia HomoloGene

Symbol Serpina6

Unigene Mm.290079

RefSeq Protein NP_031644

RefSeq DNA NM_007618

Description serine (or cysteine) peptidase inhibitor, clade A, member 6
Experiment help page p-Value q-Value period phase
JTK 3.33e-13 1.01e-10 23.0 14.0
Lomb Scargle 3.18e-07 0.000149397 22.725 19.42
DeLichtenberg 0.0594 0.60652 24.0 NA
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1459860_x_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_030706

Probeset 1459860_x_at

Links Wikipedia HomoloGene

Symbol Trim2

Unigene Mm.44876

RefSeq Protein NP_109631

RefSeq DNA NM_030706

Description tripartite motif-containing 2
Experiment help page p-Value q-Value period phase
JTK 3.33e-13 1.01e-10 24.0 0.0
Lomb Scargle 5.89e-07 0.000187074 23.525 6.12
DeLichtenberg 0.0199 0.568452 24.0 NA
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1437341_x_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_001146318
RNAseq_NM_009923

Probeset 1437341_x_at

Links Wikipedia HomoloGene

Symbol Cnp

Unigene Mm.15711

RefSeq Protein NP_001139790   NP_034053

RefSeq DNA NM_001146318
NM_009923

Description 2',3'-cyclic nucleotide 3' phosphodiesterase
Experiment help page p-Value q-Value period phase
JTK 3.33e-13 1.01e-10 25.0 1.5
Lomb Scargle 8.77e-07 0.000235438 24.836 10.0
DeLichtenberg 0.1787 0.981914 24.0 NA
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1422568_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_023668

Probeset 1422568_at

Links Wikipedia HomoloGene

Symbol Ndel1

Unigene Mm.31979

RefSeq Protein NP_076157

RefSeq DNA NM_023668

Description nuclear distribution gene E-like homolog 1 (A. nidulans)
Experiment help page p-Value q-Value period phase
JTK 3.33e-13 1.01e-10 21.0 13.0
Lomb Scargle 2.0e-06 0.000374282 21.623 18.54
DeLichtenberg 0.2557 1.0 24.0 NA
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1424175_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_017376
RNAseq_NM_153484

Probeset 1424175_at

Links Wikipedia HomoloGene

Symbol Tef

Unigene Mm.270278

RefSeq Protein NP_059072   NP_705617

RefSeq DNA NM_017376
NM_153484

Description thyrotroph embryonic factor
Experiment help page p-Value q-Value period phase
JTK 4.17e-13 1.26e-10 23.0 12.0
Lomb Scargle 1.15e-06 0.000268737 22.725 18.01
DeLichtenberg 0.0014 0.295053 24.0 NA
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CIRCA