CIRCA

NEWS (6/9/2014): We added two new datasets: "Mouse Macrophages" and "Mouse Heart LD"

(Examples 1451371_at 1422470_at gnf1m00037_a_at or Arntl or kinase inhibitor )
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Experiment help page
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1450869_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_010197

Probeset 1450869_at

Links Wikipedia HomoloGene

Symbol Fgf1

Unigene Mm.241282

RefSeq Protein NP_034327

RefSeq DNA NM_010197

Description fibroblast growth factor 1
Experiment help page p-Value q-Value period phase
JTK 6.54e-14 2.5e-11 25.0 18.0
Lomb Scargle 8.41e-08 9.13045e-05 24.836 0.21
DeLichtenberg 0.0511 0.587175 24.0 NA
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1416461_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_001111289
RNAseq_NM_001111290
RNAseq_NM_001111291
RNAseq_NM_001111292
RNAseq_NM_016739
RNAseq_XR_106078

Probeset 1416461_at

Links Wikipedia HomoloGene

Symbol Caprin1
LOC100504494

Unigene Mm.427589

RefSeq Protein NP_001104759   NP_001104760   NP_001104761   NP_001104762   NP_058019

RefSeq DNA NM_001111289
NM_001111290
NM_001111291
NM_001111292
NM_016739
XR_106078

Description cell cycle associated protein 1 /// hypothetical LOC100504494
Experiment help page p-Value q-Value period phase
JTK 6.54e-14 2.5e-11 25.0 22.5
Lomb Scargle 1.17e-07 9.57407e-05 24.383 5.95
DeLichtenberg 0.0518 0.5898 24.0 NA
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1451548_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_029692

Probeset 1451548_at

Links Wikipedia HomoloGene

Symbol Upp2

Unigene Mm.200370

RefSeq Protein NP_083968

RefSeq DNA NM_029692

Description uridine phosphorylase 2
Experiment help page p-Value q-Value period phase
JTK 6.54e-14 2.5e-11 24.0 12.0
Lomb Scargle 3.09e-07 0.000148258 23.525 18.24
DeLichtenberg 0.006 0.568452 24.0 NA
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1436219_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_153794

Probeset 1436219_at

Links Wikipedia HomoloGene

Symbol 4933403F05Rik

Unigene Mm.125857

RefSeq Protein NP_722489

RefSeq DNA NM_153794

Description RIKEN cDNA 4933403F05 gene
Experiment help page p-Value q-Value period phase
JTK 6.54e-14 2.5e-11 25.0 4.5
Lomb Scargle 8.44e-07 0.000232065 23.946 11.68
DeLichtenberg 0.0594 0.60652 24.0 NA
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1417373_a_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_009447

Probeset 1417373_a_at

Links Wikipedia HomoloGene

Symbol Tuba4a

Unigene Mm.1155

RefSeq Protein NP_033473

RefSeq DNA NM_009447

Description tubulin, alpha 4A
Experiment help page p-Value q-Value period phase
JTK 6.54e-14 2.5e-11 25.0 0.5
Lomb Scargle 8.72e-07 0.000235438 24.836 7.31
DeLichtenberg 0.1664 0.943407 24.0 NA
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1424367_a_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_001164086
RNAseq_NM_001164087
RNAseq_NM_011983

Probeset 1424367_a_at

Links Wikipedia HomoloGene

Symbol Homer2

Unigene Mm.228

RefSeq Protein NP_001157558   NP_001157559   NP_036113

RefSeq DNA NM_001164086
NM_001164087
NM_011983

Description homer homolog 2 (Drosophila)
Experiment help page p-Value q-Value period phase
JTK 8.29e-14 3.04e-11 23.0 15.0
Lomb Scargle 5.24e-08 9.13045e-05 23.525 23.06
DeLichtenberg 0.0265 0.568452 24.0 NA
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1425623_a_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_144855
RNAseq_NM_178224

Probeset 1425623_a_at

Links Wikipedia HomoloGene

Symbol Cbs

Unigene Mm.206417

RefSeq Protein NP_659104   NP_835742

RefSeq DNA NM_144855
NM_178224

Description cystathionine beta-synthase
Experiment help page p-Value q-Value period phase
JTK 8.29e-14 3.04e-11 25.0 3.5
Lomb Scargle 4.99e-07 0.000177938 24.383 10.93
DeLichtenberg 0.0231 0.568452 24.0 NA
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1418645_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_010401

Probeset 1418645_at

Links Wikipedia HomoloGene

Symbol Hal

Unigene Mm.13000

RefSeq Protein NP_034531

RefSeq DNA NM_010401

Description histidine ammonia lyase
Experiment help page p-Value q-Value period phase
JTK 8.29e-14 3.04e-11 25.0 2.5
Lomb Scargle 5.2e-07 0.000178012 24.836 10.27
DeLichtenberg 0.0265 0.568452 24.0 NA
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1450714_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_001102458
RNAseq_NM_018745

Probeset 1450714_at

Links Wikipedia HomoloGene

Symbol Azin1

Unigene Mm.250214

RefSeq Protein NP_001095928   NP_061215

RefSeq DNA NM_001102458
NM_018745

Description antizyme inhibitor 1
Experiment help page p-Value q-Value period phase
JTK 8.29e-14 3.04e-11 23.0 12.0
Lomb Scargle 5.37e-07 0.00017877 22.725 18.22
DeLichtenberg 0.5265 1.0 24.0 NA
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1425927_a_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_030693
RNAseq_NR_033136

Probeset 1425927_a_at

Links Wikipedia HomoloGene

Symbol Atf5

Unigene Mm.389890

RefSeq Protein NP_109618

RefSeq DNA NM_030693
NR_033136

Description activating transcription factor 5
Experiment help page p-Value q-Value period phase
JTK 8.29e-14 3.04e-11 25.0 2.0
Lomb Scargle 5.78e-06 0.000670138 24.836 10.51
DeLichtenberg 0.0073 0.568452 24.0 NA
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1434150_a_at Data
Experiment Mouse Pituitary 48 hour Hughes 2009 (Affymetrix)

Probeset 1434150_a_at

Links Wikipedia HomoloGene

Symbol Higd1c
Mettl7a1
Mettl7a2

Unigene Mm.440573

RefSeq Protein NP_001002900   NP_081610   NP_955771

RefSeq DNA NM_001002900
NM_027334
NM_199477

Description HIG1 domain family, member 1C /// methyltransferase like 7A1 /// methyltransferase like 7A2
Experiment help page p-Value q-Value period phase
JTK 5.57e-15 3.59e-11 24.0 14.0
Lomb Scargle 2.56e-07 0.00201451 23.946 20.39
DeLichtenberg 0.2844 1.0 24.0 NA
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1455438_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_021534

Probeset 1455438_at

Links Wikipedia HomoloGene

Symbol Pxmp4

Unigene Mm.24673

RefSeq Protein NP_067509

RefSeq DNA NM_021534

Description peroxisomal membrane protein 4
Experiment help page p-Value q-Value period phase
JTK 1.05e-13 3.7e-11 25.0 23.0
Lomb Scargle 1.59e-07 0.000117558 24.836 5.96
DeLichtenberg 0.0232 0.568452 24.0 NA
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1419393_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_031884

Probeset 1419393_at

Links Wikipedia HomoloGene

Symbol Abcg5

Unigene Mm.289590

RefSeq Protein NP_114090

RefSeq DNA NM_031884

Description ATP-binding cassette, sub-family G (WHITE), member 5
Experiment help page p-Value q-Value period phase
JTK 1.05e-13 3.7e-11 24.0 10.0
Lomb Scargle 8.03e-08 9.13045e-05 23.525 17.22
DeLichtenberg 0.0238 0.568452 24.0 NA
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1418603_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_016847

Probeset 1418603_at

Links Wikipedia HomoloGene

Symbol Avpr1a

Unigene Mm.4351

RefSeq Protein NP_058543

RefSeq DNA NM_016847

Description arginine vasopressin receptor 1A
Experiment help page p-Value q-Value period phase
JTK 1.05e-13 3.7e-11 25.0 23.5
Lomb Scargle 3.93e-07 0.000159436 24.383 6.6
DeLichtenberg 0.0043 0.568452 24.0 NA
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1448162_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_011693

Probeset 1448162_at

Links Wikipedia HomoloGene

Symbol Vcam1

Unigene Mm.76649

RefSeq Protein NP_035823

RefSeq DNA NM_011693

Description vascular cell adhesion molecule 1
Experiment help page p-Value q-Value period phase
JTK 1.05e-13 3.7e-11 23.0 14.0
Lomb Scargle 1.76e-05 0.00131857 23.525 19.49
DeLichtenberg 0.0185 0.568452 24.0 NA
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1436545_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_172442

Probeset 1436545_at

Links Wikipedia HomoloGene

Symbol Dtx4

Unigene Mm.247695

RefSeq Protein NP_766030

RefSeq DNA NM_172442

Description deltex 4 homolog (Drosophila)
Experiment help page p-Value q-Value period phase
JTK 1.05e-13 3.7e-11 24.0 0.5
Lomb Scargle 7.8e-05 0.00351185 23.525 6.72
DeLichtenberg 0.0072 0.568452 24.0 NA
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1455083_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_001001798
RNAseq_NM_001037863

Probeset 1455083_at

Links Wikipedia HomoloGene

Symbol Atp11c

Unigene Mm.327798

RefSeq Protein NP_001001798   NP_001032952

RefSeq DNA NM_001001798
NM_001037863

Description ATPase, class VI, type 11C
Experiment help page p-Value q-Value period phase
JTK 1.19e-13 4.15e-11 24.0 7.75
Lomb Scargle 1.04e-06 0.000259144 24.383 13.6
DeLichtenberg 0.8408 1.0 24.0 NA
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1436736_x_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_001109988
RNAseq_NM_001109989
RNAseq_NM_001109990
RNAseq_NM_053078

Probeset 1436736_x_at

Links Wikipedia HomoloGene

Symbol D0H4S114

Unigene Mm.407415

RefSeq Protein NP_001103458   NP_001103459   NP_001103460   NP_444308

RefSeq DNA NM_001109988
NM_001109989
NM_001109990
NM_053078

Description DNA segment, human D4S114
Experiment help page p-Value q-Value period phase
JTK 1.33e-13 4.53e-11 24.0 14.0
Lomb Scargle 2.2e-07 0.00012674 24.383 20.55
DeLichtenberg 0.0014 0.295053 24.0 NA
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1433655_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_025999

Probeset 1433655_at

Links Wikipedia HomoloGene

Symbol Rnf141

Unigene Mm.96867

RefSeq Protein NP_080275

RefSeq DNA NM_025999

Description ring finger protein 141
Experiment help page p-Value q-Value period phase
JTK 1.33e-13 4.53e-11 27.0 2.5
Lomb Scargle 5.27e-07 0.000178708 25.306 11.72
DeLichtenberg 0.5362 1.0 24.0 NA
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1448234_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_001037940
RNAseq_NM_001037941
RNAseq_NM_001127367
RNAseq_NM_011847

Probeset 1448234_at

Links Wikipedia HomoloGene

Symbol Dnajb6

Unigene Mm.290110

RefSeq Protein NP_001033029   NP_001033030   NP_001120839   NP_035977

RefSeq DNA NM_001037940
NM_001037941
NM_001127367
NM_011847

Description DnaJ (Hsp40) homolog, subfamily B, member 6
Experiment help page p-Value q-Value period phase
JTK 1.33e-13 4.53e-11 24.0 15.0
Lomb Scargle 3.51e-06 0.000515024 23.946 23.22
DeLichtenberg 0.1469 0.890263 24.0 NA
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CIRCA