CIRCA

NEWS (6/9/2014): We added two new datasets: "Mouse Macrophages" and "Mouse Heart LD"

(Examples 1451371_at 1422470_at gnf1m00037_a_at or Arntl or kinase inhibitor )
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1416832_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_001135149
RNAseq_NM_001135150
RNAseq_NM_026228

Probeset 1416832_at

Links Wikipedia HomoloGene

Symbol Slc39a8

Unigene Mm.30239

RefSeq Protein NP_001128621   NP_001128622   NP_080504

RefSeq DNA NM_001135149
NM_001135150
NM_026228

Description solute carrier family 39 (metal ion transporter), member 8
Experiment help page p-Value q-Value period phase
JTK 1.52e-14 7.23e-12 25.0 2.0
Lomb Scargle 4.87e-07 0.000177938 24.383 10.49
DeLichtenberg 0.1819 0.990447 24.0 NA
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1422943_a_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_013560

Probeset 1422943_a_at

Links Wikipedia HomoloGene

Symbol Hspb1

Unigene Mm.13849

RefSeq Protein NP_038588

RefSeq DNA NM_013560

Description heat shock protein 1
Experiment help page p-Value q-Value period phase
JTK 1.52e-14 7.23e-12 26.0 19.0
Lomb Scargle 2.54e-06 0.000419621 25.794 1.79
DeLichtenberg 0.0057 0.568452 24.0 NA
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1447380_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_027908

Probeset 1447380_at

Links Wikipedia HomoloGene

Symbol Amdhd1

Unigene Mm.244518

RefSeq Protein NP_082184

RefSeq DNA NM_027908

Description amidohydrolase domain containing 1
Experiment help page p-Value q-Value period phase
JTK 1.74e-14 8.16e-12 24.0 5.5
Lomb Scargle 1.91e-07 0.000120269 23.525 12.37
DeLichtenberg 0.0291 0.568452 24.0 NA
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1451018_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_026609

Probeset 1451018_at

Links Wikipedia HomoloGene

Symbol Leprotl1

Unigene Mm.34212

RefSeq Protein NP_080885

RefSeq DNA NM_026609

Description leptin receptor overlapping transcript-like 1
Experiment help page p-Value q-Value period phase
JTK 1.95e-14 8.54e-12 25.0 22.5
Lomb Scargle 8.02e-08 9.13045e-05 24.836 5.94
DeLichtenberg 0.0223 0.568452 24.0 NA
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1426765_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_001195390
RNAseq_NM_133850

Probeset 1426765_at

Links Wikipedia HomoloGene

Symbol Commd7

Unigene Mm.294478

RefSeq Protein NP_001182319   NP_598611

RefSeq DNA NM_001195390
NM_133850

Description COMM domain containing 7
Experiment help page p-Value q-Value period phase
JTK 1.95e-14 8.54e-12 25.0 0.0
Lomb Scargle 1.24e-07 9.64228e-05 24.836 6.66
DeLichtenberg 0.0471 0.58548 24.0 NA
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1427213_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_008824

Probeset 1427213_at

Links Wikipedia HomoloGene

Symbol Pfkfb1

Unigene Mm.249131

RefSeq Protein NP_032850

RefSeq DNA NM_008824

Description 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1
Experiment help page p-Value q-Value period phase
JTK 1.95e-14 8.54e-12 24.0 18.0
Lomb Scargle 2.06e-07 0.000122247 23.525 0.05
DeLichtenberg 0.0405 0.57458 24.0 NA
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1460673_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_010236

Probeset 1460673_at

Links Wikipedia HomoloGene

Symbol Fpgs

Unigene Mm.3830

RefSeq Protein NP_034366

RefSeq DNA NM_010236

Description folylpolyglutamyl synthetase
Experiment help page p-Value q-Value period phase
JTK 1.95e-14 8.54e-12 25.0 22.5
Lomb Scargle 7.08e-08 9.13045e-05 24.836 5.94
DeLichtenberg 0.0291 0.568452 24.0 NA
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1425646_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_145497

Probeset 1425646_at

Links Wikipedia HomoloGene

Symbol BC016495

Unigene Mm.211595

RefSeq Protein NP_663472

RefSeq DNA NM_145497

Description cDNA sequence BC016495
Experiment help page p-Value q-Value period phase
JTK 1.95e-14 8.54e-12 24.3333 14.6667
Lomb Scargle 9.11e-08 9.13045e-05 24.383 21.28
DeLichtenberg 0.011 0.568452 24.0 NA
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1438751_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_001033286

Probeset 1438751_at

Links Wikipedia HomoloGene

Symbol Slc30a10

Unigene Mm.227117

RefSeq Protein NP_001028458

RefSeq DNA NM_001033286

Description solute carrier family 30, member 10
Experiment help page p-Value q-Value period phase
JTK 1.95e-14 8.54e-12 24.0 0.0
Lomb Scargle 3.16e-07 0.000149397 23.946 6.16
DeLichtenberg 0.0001 0.0437874 24.0 NA
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1428487_s_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_001039710
RNAseq_NM_026424

Probeset 1428487_s_at

Links Wikipedia HomoloGene

Symbol Coq10b

Unigene Mm.281019

RefSeq Protein NP_001034799   NP_080700

RefSeq DNA NM_001039710
NM_026424

Description coenzyme Q10 homolog B (S. cerevisiae)
Experiment help page p-Value q-Value period phase
JTK 1.95e-14 8.54e-12 24.0 12.5
Lomb Scargle 4.38e-07 0.000164619 23.946 18.1
DeLichtenberg 0.0002 0.0798248 24.0 NA
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1417828_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_001109045
RNAseq_NM_007474

Probeset 1417828_at

Links Wikipedia HomoloGene

Symbol Aqp8

Unigene Mm.273175

RefSeq Protein NP_001102515   NP_031500

RefSeq DNA NM_001109045
NM_007474

Description aquaporin 8
Experiment help page p-Value q-Value period phase
JTK 3.18e-14 1.35e-11 26.0 22.0
Lomb Scargle 1.2e-07 9.57407e-05 25.306 6.0
DeLichtenberg 0.001 0.249177 24.0 NA
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1440840_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq None

Probeset 1440840_at

Links Wikipedia HomoloGene

Symbol D630004K10Rik

Unigene None

RefSeq Protein None

RefSeq DNA None

Description RIKEN cDNA D630004K10 gene
Experiment help page p-Value q-Value period phase
JTK 3.18e-14 1.35e-11 24.0 12.0
Lomb Scargle 3.48e-06 0.000515024 23.946 18.04
DeLichtenberg 0.008 0.568452 24.0 NA
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1454617_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_001042591

Probeset 1454617_at

Links Wikipedia HomoloGene

Symbol Arrdc3

Unigene Mm.423137

RefSeq Protein NP_001036056

RefSeq DNA NM_001042591

Description arrestin domain containing 3
Experiment help page p-Value q-Value period phase
JTK 3.18e-14 1.35e-11 24.0 7.5
Lomb Scargle 1.6e-05 0.00124847 23.118 14.39
DeLichtenberg 0.001 0.249177 24.0 NA
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1448376_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_030215

Probeset 1448376_at

Links Wikipedia HomoloGene

Symbol Wrnip1

Unigene Mm.286680

RefSeq Protein NP_084491

RefSeq DNA NM_030215

Description Werner helicase interacting protein 1
Experiment help page p-Value q-Value period phase
JTK 4.05e-14 1.68e-11 26.0 23.0
Lomb Scargle 1.55e-07 0.000116511 25.306 6.49
DeLichtenberg 0.0287 0.568452 24.0 NA
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1434485_a_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_139297

Probeset 1434485_a_at

Links Wikipedia HomoloGene

Symbol Ugp2

Unigene Mm.28877

RefSeq Protein NP_647458

RefSeq DNA NM_139297

Description UDP-glucose pyrophosphorylase 2
Experiment help page p-Value q-Value period phase
JTK 4.05e-14 1.68e-11 25.0 12.0
Lomb Scargle 5.52e-07 0.000179106 24.383 18.19
DeLichtenberg 0.4515 1.0 24.0 NA
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1448607_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_021524

Probeset 1448607_at

Links Wikipedia HomoloGene

Symbol Nampt

Unigene Mm.202727

RefSeq Protein NP_067499

RefSeq DNA NM_021524

Description nicotinamide phosphoribosyltransferase
Experiment help page p-Value q-Value period phase
JTK 4.05e-14 1.68e-11 24.0 14.5
Lomb Scargle 9.53e-07 0.000244724 24.383 22.31
DeLichtenberg 0.0086 0.568452 24.0 NA
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1416608_a_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_030561

Probeset 1416608_a_at

Links Wikipedia HomoloGene

Symbol BC004004

Unigene Mm.290116

RefSeq Protein NP_085038

RefSeq DNA NM_030561

Description cDNA sequence BC004004
Experiment help page p-Value q-Value period phase
JTK 5.15e-14 2.06e-11 23.0 4.0
Lomb Scargle 1.12e-07 9.57407e-05 23.118 10.05
DeLichtenberg 0.2652 1.0 24.0 NA
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1427370_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_027908

Probeset 1427370_at

Links Wikipedia HomoloGene

Symbol Amdhd1

Unigene Mm.244518

RefSeq Protein NP_082184

RefSeq DNA NM_027908

Description amidohydrolase domain containing 1
Experiment help page p-Value q-Value period phase
JTK 5.15e-14 2.06e-11 25.0 4.5
Lomb Scargle 2.04e-07 0.000122247 23.946 11.26
DeLichtenberg 0.0251 0.568452 24.0 NA
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1418604_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_016847

Probeset 1418604_at

Links Wikipedia HomoloGene

Symbol Avpr1a

Unigene Mm.4351

RefSeq Protein NP_058543

RefSeq DNA NM_016847

Description arginine vasopressin receptor 1A
Experiment help page p-Value q-Value period phase
JTK 5.15e-14 2.06e-11 25.0 23.0
Lomb Scargle 2.53e-07 0.000130178 24.383 6.39
DeLichtenberg 0.0001 0.0437874 24.0 NA
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1425195_a_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_009338
RNAseq_NM_153151

Probeset 1425195_a_at

Links Wikipedia HomoloGene

Symbol Acat2
Acat3

Unigene Mm.229342

RefSeq Protein NP_033364   NP_694791

RefSeq DNA NM_009338
NM_153151

Description acetyl-Coenzyme A acetyltransferase 2 /// acetyl-Coenzyme A acetyltransferase 3
Experiment help page p-Value q-Value period phase
JTK 5.15e-14 2.06e-11 25.0 1.0
Lomb Scargle 2.38e-07 0.000129326 24.836 8.83
DeLichtenberg 0.3844 1.0 24.0 NA
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CIRCA