CIRCA

NEWS (6/9/2014): We added two new datasets: "Mouse Macrophages" and "Mouse Heart LD"

(Examples 1451371_at 1422470_at gnf1m00037_a_at or Arntl or kinase inhibitor )
Query syntax mode: Query help page

("0.5" or "2e-10")
("0-6" or "10.30-11.10")
Output mode
("50" or "100", max: "1000")
Experiment help page
(If nothing is selected, CIRCA will search all experiments.)
1456264_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_001195390
RNAseq_NM_133850

Probeset 1456264_at

Links Wikipedia HomoloGene

Symbol Commd7

Unigene Mm.294478

RefSeq Protein NP_001182319   NP_598611

RefSeq DNA NM_001195390
NM_133850

Description COMM domain containing 7
Experiment help page p-Value q-Value period phase
JTK 5.42e-08 3.26e-06 27.0 22.0
Lomb Scargle 2.64e-05 0.00169611 26.302 6.94
DeLichtenberg 0.0291 0.568452 24.0 NA
back to the top
1449821_a_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_133771

Probeset 1449821_a_at

Links Wikipedia HomoloGene

Symbol Memo1

Unigene Mm.311874

RefSeq Protein NP_598532

RefSeq DNA NM_133771

Description mediator of cell motility 1
Experiment help page p-Value q-Value period phase
JTK 5.42e-08 3.26e-06 23.0 20.0
Lomb Scargle 5.21e-05 0.00267227 22.345 1.22
DeLichtenberg 0.5605 1.0 24.0 NA
back to the top
1452011_a_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_026430

Probeset 1452011_a_at

Links Wikipedia HomoloGene

Symbol Uxs1

Unigene Mm.387202

RefSeq Protein NP_080706

RefSeq DNA NM_026430

Description UDP-glucuronate decarboxylase 1
Experiment help page p-Value q-Value period phase
JTK 5.42e-08 3.26e-06 22.5 20.25
Lomb Scargle 8.93e-05 0.00383573 22.725 1.45
DeLichtenberg 0.1152 0.785432 24.0 NA
back to the top
1435137_s_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NR_002860

Probeset 1435137_s_at

Links Wikipedia HomoloGene

Symbol 1200015M12Rik
A130040M12Rik
E430024C06Rik

Unigene None

RefSeq Protein None

RefSeq DNA NR_002860

Description RIKEN cDNA 1200015M12 gene /// RIKEN cDNA A130040M12 gene /// RIKEN cDNA E430024C06 gene
Experiment help page p-Value q-Value period phase
JTK 5.42e-08 3.26e-06 26.0 3.0
Lomb Scargle 0.000326 0.00935301 24.836 9.15
DeLichtenberg 0.0521 0.5898 24.0 NA
back to the top
1438431_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_011994

Probeset 1438431_at

Links Wikipedia HomoloGene

Symbol Abcd2

Unigene Mm.295456

RefSeq Protein NP_036124

RefSeq DNA NM_011994

Description ATP-binding cassette, sub-family D (ALD), member 2
Experiment help page p-Value q-Value period phase
JTK 5.42e-08 3.26e-06 23.0 11.5
Lomb Scargle 0.000192 0.00643343 23.118 17.95
DeLichtenberg 0.008 0.568452 24.0 NA
back to the top
1435372_a_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_011119

Probeset 1435372_a_at

Links Wikipedia HomoloGene

Symbol Pa2g4

Unigene Mm.4742

RefSeq Protein NP_035249

RefSeq DNA NM_011119

Description proliferation-associated 2G4
Experiment help page p-Value q-Value period phase
JTK 5.42e-08 3.26e-06 27.0 11.5
Lomb Scargle 0.000117 0.00459253 26.829 18.22
DeLichtenberg 0.4885 1.0 24.0 NA
back to the top
1455052_a_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_175245

Probeset 1455052_a_at

Links Wikipedia HomoloGene

Symbol Mzt1

Unigene Mm.479577

RefSeq Protein NP_780454

RefSeq DNA NM_175245

Description mitotic spindle organizing protein 1
Experiment help page p-Value q-Value period phase
JTK 5.42e-08 3.26e-06 28.0 7.75
Lomb Scargle 0.000249 0.00776099 26.829 14.13
DeLichtenberg 0.6972 1.0 24.0 NA
back to the top
1426676_s_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_138599

Probeset 1426676_s_at

Links Wikipedia HomoloGene

Symbol Tomm70a

Unigene Mm.213292

RefSeq Protein NP_613065

RefSeq DNA NM_138599

Description translocase of outer mitochondrial membrane 70 homolog A (yeast)
Experiment help page p-Value q-Value period phase
JTK 5.42e-08 3.26e-06 28.0 10.0
Lomb Scargle 0.00036 0.00994266 27.379 17.99
DeLichtenberg 0.9141 1.0 24.0 NA
back to the top
1456653_a_at Data
Experiment Mouse Pituitary 48 hour Hughes 2009 (Affymetrix)

Probeset 1456653_a_at

Links Wikipedia HomoloGene

Symbol Mthfd1l

Unigene Mm.184752

RefSeq Protein NP_001164256   NP_001164257   NP_758512

RefSeq DNA NM_001170785
NM_001170786
NM_172308

Description methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
Experiment help page p-Value q-Value period phase
JTK 2.89e-09 3.34e-06 24.5 13.25
Lomb Scargle 1.1e-05 0.0145915 23.946 19.98
DeLichtenberg 0.0344 0.29043 24.0 NA
back to the top
10446965 Data
Experiment Mouse 1.OST Heart (Affymetrix)

UCSC RNAseq RNAseq_NM_207246   RNAseq_NM_001166493

Probeset 10446965

Links Wikipedia HomoloGene

Symbol Rasgrp3

Unigene Mm.329203

RefSeq Protein None

RefSeq DNA NM_207246
NM_001166493

Description RAS, guanyl releasing protein 3
Experiment help page p-Value q-Value period phase
JTK 9.4304e-10 3.35307e-06 26.0 23.0
Lomb Scargle 0.000898 0.630717 24.783 23.9
DeLichtenberg 0.0002 0.0121767 24.0 NA
back to the top
10365482 Data
Experiment Mouse 1.OST Heart (Affymetrix)

UCSC RNAseq RNAseq_NM_011595

Probeset 10365482

Links Wikipedia HomoloGene

Symbol Timp3

Unigene Mm.4871

RefSeq Protein None

RefSeq DNA NM_011595

Description tissue inhibitor of metalloproteinase 3
Experiment help page p-Value q-Value period phase
JTK 9.4304e-10 3.35307e-06 23.0 14.0
Lomb Scargle 0.000524 0.630717 23.064 14.31
DeLichtenberg 0.652 1.0 24.0 NA
back to the top
10425601 Data
Experiment Mouse 1.OST Heart (Affymetrix)

UCSC RNAseq RNAseq_NM_153484   RNAseq_NM_017376

Probeset 10425601

Links Wikipedia HomoloGene

Symbol Tef

Unigene Mm.270278

RefSeq Protein None

RefSeq DNA NM_153484
NM_017376

Description thyrotroph embryonic factor
Experiment help page p-Value q-Value period phase
JTK 9.4304e-10 3.35307e-06 24.0 13.0
Lomb Scargle 0.000429 0.630717 23.064 13.33
DeLichtenberg 0.8035 1.0 24.0 NA
back to the top
10390691 Data
Experiment Mouse 1.OST Heart (Affymetrix)

UCSC RNAseq RNAseq_NM_145434

Probeset 10390691

Links Wikipedia HomoloGene

Symbol Nr1d1

Unigene Mm.390397

RefSeq Protein None

RefSeq DNA NM_145434

Description nuclear receptor subfamily 1, group D, member 1
Experiment help page p-Value q-Value period phase
JTK 9.4304e-10 3.35307e-06 24.0 7.0
Lomb Scargle 0.000725 0.630717 23.064 6.8
DeLichtenberg 0.2725 1.0 24.0 NA
back to the top
1430522_a_at Data
Experiment Mouse NIH 3T3 Immortilized Cell Line 48 hour Hughes 2009 (Affymetrix)

Probeset 1430522_a_at

Links Wikipedia HomoloGene

Symbol Vamp5

Unigene Mm.440321

RefSeq Protein NP_001074211   NP_058568

RefSeq DNA NM_001080742
NM_016872

Description vesicle-associated membrane protein 5
Experiment help page p-Value q-Value period phase
JTK 8.5e-10 3.49e-06 42.0 1.5
Lomb Scargle 5.66e-06 0.0293658 42.0 6.38
DeLichtenberg 0.0426 0.475979 24.0 NA
back to the top
1428082_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_027976

Probeset 1428082_at

Links Wikipedia HomoloGene

Symbol Acsl5

Unigene Mm.292056

RefSeq Protein NP_082252

RefSeq DNA NM_027976

Description acyl-CoA synthetase long-chain family member 5
Experiment help page p-Value q-Value period phase
JTK 5.88e-08 3.51e-06 25.0 0.5
Lomb Scargle 5.3e-06 0.0006443 25.794 7.81
DeLichtenberg 0.6964 1.0 24.0 NA
back to the top
1421609_a_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_001037842
RNAseq_NM_053097

Probeset 1421609_a_at

Links Wikipedia HomoloGene

Symbol Cml3

Unigene Mm.479603

RefSeq Protein NP_001032931   NP_444327

RefSeq DNA NM_001037842
NM_053097

Description camello-like 3
Experiment help page p-Value q-Value period phase
JTK 5.88e-08 3.51e-06 23.0 18.5
Lomb Scargle 0.000338 0.00959354 23.946 0.0
DeLichtenberg 0.0535 0.593896 24.0 NA
back to the top
1430688_s_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_030021

Probeset 1430688_s_at

Links Wikipedia HomoloGene

Symbol D730039F16Rik

Unigene Mm.215255

RefSeq Protein NP_084297

RefSeq DNA NM_030021

Description RIKEN cDNA D730039F16 gene
Experiment help page p-Value q-Value period phase
JTK 5.88e-08 3.51e-06 29.0 18.5
Lomb Scargle 2.01e-05 0.00142573 27.951 5.82
DeLichtenberg 0.1361 0.861508 24.0 NA
back to the top
10540122 Data
Experiment Mouse 1.OST Lung (Affymetrix)

UCSC RNAseq RNAseq_NM_009320

Probeset 10540122

Links Wikipedia HomoloGene

Symbol Slc6a6

Unigene Mm.395650

RefSeq Protein None

RefSeq DNA NM_009320

Description solute carrier family 6 (neurotransmitter transporter, taurine), member 6
Experiment help page p-Value q-Value period phase
JTK 5.92987e-09 3.5736e-06 24.0 10.0
Lomb Scargle 0.001 0.307798 23.064 9.69
DeLichtenberg 0.64 1.0 24.0 NA
back to the top
10594066 Data
Experiment Mouse 1.OST Lung (Affymetrix)

UCSC RNAseq RNAseq_NM_010729

Probeset 10594066

Links Wikipedia HomoloGene

Symbol Loxl1

Unigene Mm.250492

RefSeq Protein None

RefSeq DNA NM_010729

Description lysyl oxidase-like 1
Experiment help page p-Value q-Value period phase
JTK 5.92987e-09 3.5736e-06 24.0 3.0
Lomb Scargle 0.000751 0.307798 23.892 3.19
DeLichtenberg 0.8907 1.0 24.0 NA
back to the top
10551226 Data
Experiment Mouse 1.OST Lung (Affymetrix)

UCSC RNAseq RNAseq_NM_009997   RNAseq_NM_007812

Probeset 10551226

Links Wikipedia HomoloGene

Symbol Cyp2a4

Unigene Mm.154643

RefSeq Protein None

RefSeq DNA NM_009997
NM_007812

Description cytochrome P450, family 2, subfamily a, polypeptide 4
Experiment help page p-Value q-Value period phase
JTK 5.92987e-09 3.5736e-06 26.0 11.0
Lomb Scargle 0.000652 0.307798 24.783 10.22
DeLichtenberg 0.0286 0.486091 24.0 NA
back to the top
CIRCA