CIRCA

NEWS (6/9/2014): We added two new datasets: "Mouse Macrophages" and "Mouse Heart LD"

(Examples 1451371_at 1422470_at gnf1m00037_a_at or Arntl or kinase inhibitor )
Query syntax mode: Query help page

("0.5" or "2e-10")
("0-6" or "10.30-11.10")
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Experiment help page
(If nothing is selected, CIRCA will search all experiments.)
10447904 Data
Experiment Mouse 1.OST Liver (Affymetrix)

UCSC RNAseq RNAseq_NM_199252   RNAseq_NM_001142539

Probeset 10447904

Links Wikipedia HomoloGene

Symbol Unc93a

Unigene Mm.390935

RefSeq Protein None

RefSeq DNA NM_199252
NM_001142539

Description unc-93 homolog A (C. elegans)
Experiment help page p-Value q-Value period phase
JTK 5.92987e-09 3.19458e-06 24.0 6.0
Lomb Scargle 0.00163 0.173327 23.892 5.09
DeLichtenberg 0.847 1.0 24.0 NA
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10529330 Data
Experiment Mouse 1.OST Liver (Affymetrix)

UCSC RNAseq RNAseq_NM_011914

Probeset 10529330

Links Wikipedia HomoloGene

Symbol Whsc2

Unigene Mm.332320

RefSeq Protein None

RefSeq DNA NM_011914

Description Wolf-Hirschhorn syndrome candidate 2 (human)
Experiment help page p-Value q-Value period phase
JTK 5.92987e-09 3.19458e-06 24.0 22.0
Lomb Scargle 0.000735 0.173327 23.064 21.88
DeLichtenberg 0.9385 1.0 24.0 NA
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10558961 Data
Experiment Mouse 1.OST Liver (Affymetrix)

UCSC RNAseq RNAseq_NM_053082

Probeset 10558961

Links Wikipedia HomoloGene

Symbol Tspan4

Unigene Mm.245355

RefSeq Protein None

RefSeq DNA NM_053082

Description tetraspanin 4
Experiment help page p-Value q-Value period phase
JTK 5.92987e-09 3.19458e-06 24.0 15.0
Lomb Scargle 0.000734 0.173327 23.892 15.84
DeLichtenberg 0.4203 1.0 24.0 NA
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10464504 Data
Experiment Mouse 1.OST Liver (Affymetrix)

UCSC RNAseq RNAseq_NM_008513

Probeset 10464504

Links Wikipedia HomoloGene

Symbol Lrp5

Unigene Mm.274581

RefSeq Protein None

RefSeq DNA NM_008513

Description low density lipoprotein receptor-related protein 5
Experiment help page p-Value q-Value period phase
JTK 5.92987e-09 3.19458e-06 24.0 0.0
Lomb Scargle 0.000551 0.173327 23.064 22.32
DeLichtenberg 0.0348 0.464296 24.0 NA
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10491621 Data
Experiment Mouse 1.OST Liver (Affymetrix)

UCSC RNAseq RNAseq_NM_172679

Probeset 10491621

Links Wikipedia HomoloGene

Symbol 4932438A13Rik

Unigene Mm.207907

RefSeq Protein None

RefSeq DNA NM_172679

Description RIKEN cDNA 4932438A13 gene
Experiment help page p-Value q-Value period phase
JTK 5.92987e-09 3.19458e-06 24.0 23.0
Lomb Scargle 0.000757 0.173327 23.892 22.24
DeLichtenberg 0.0155 0.275272 24.0 NA
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10412921 Data
Experiment Mouse 1.OST Liver (Affymetrix)

UCSC RNAseq RNAseq_NM_008695   RNAseq_NM_026528

Probeset 10412921

Links Wikipedia HomoloGene

Symbol Nid2

Unigene Mm.20348

RefSeq Protein None

RefSeq DNA NM_008695
NM_026528

Description nidogen 2
Experiment help page p-Value q-Value period phase
JTK 5.92987e-09 3.19458e-06 24.0 22.0
Lomb Scargle 0.00105 0.173327 23.064 21.85
DeLichtenberg 0.3182 1.0 24.0 NA
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10445558 Data
Experiment Mouse 1.OST Liver (Affymetrix)

UCSC RNAseq RNAseq_NM_207161

Probeset 10445558

Links Wikipedia HomoloGene

Symbol BC048355

Unigene Mm.35801

RefSeq Protein None

RefSeq DNA NM_207161

Description cDNA sequence BC048355
Experiment help page p-Value q-Value period phase
JTK 5.92987e-09 3.19458e-06 24.0 22.0
Lomb Scargle 0.00101 0.173327 23.064 21.65
DeLichtenberg 0.7774 1.0 24.0 NA
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10524460 Data
Experiment Mouse 1.OST Liver (Affymetrix)

UCSC RNAseq RNAseq_NM_133904

Probeset 10524460

Links Wikipedia HomoloGene

Symbol Acacb

Unigene Mm.81793

RefSeq Protein None

RefSeq DNA NM_133904

Description acetyl-Coenzyme A carboxylase beta
Experiment help page p-Value q-Value period phase
JTK 5.92987e-09 3.19458e-06 24.0 21.0
Lomb Scargle 0.00112 0.173327 23.892 21.39
DeLichtenberg 0.0886 0.820381 24.0 NA
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10566767 Data
Experiment Mouse 1.OST Liver (Affymetrix)

UCSC RNAseq RNAseq_NM_001001326   RNAseq_NM_029811

Probeset 10566767

Links Wikipedia HomoloGene

Symbol St5

Unigene Mm.252009

RefSeq Protein None

RefSeq DNA NM_001001326
NM_029811

Description suppression of tumorigenicity 5
Experiment help page p-Value q-Value period phase
JTK 5.92987e-09 3.19458e-06 24.0 23.0
Lomb Scargle 0.000577 0.173327 23.064 22.1
DeLichtenberg 0.3094 1.0 24.0 NA
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10584741 Data
Experiment Mouse 1.OST Liver (Affymetrix)

UCSC RNAseq RNAseq_NM_008063

Probeset 10584741

Links Wikipedia HomoloGene

Symbol Slc37a4

Unigene Mm.30087

RefSeq Protein None

RefSeq DNA NM_008063

Description solute carrier family 37 (glucose-6-phosphate transporter), member 4
Experiment help page p-Value q-Value period phase
JTK 4.60358e-09 3.19458e-06 24.0 14.0
Lomb Scargle 0.00074 0.173327 23.892 13.48
DeLichtenberg 0.9468 1.0 24.0 NA
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1438322_x_at Data
Experiment Mouse NIH 3T3 Immortilized Cell Line 48 hour Hughes 2009 (Affymetrix)

Probeset 1438322_x_at

Links Wikipedia HomoloGene

Symbol Fdft1

Unigene Mm.474432

RefSeq Protein NP_034321

RefSeq DNA NM_010191

Description farnesyl diphosphate farnesyl transferase 1
Experiment help page p-Value q-Value period phase
JTK 7.11e-10 3.21e-06 42.0 23.0
Lomb Scargle 5.68e-05 0.0748017 42.0 3.58
DeLichtenberg 0.68 1.0 24.0 NA
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1441926_x_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_146260

Probeset 1441926_x_at

Links Wikipedia HomoloGene

Symbol Tmie

Unigene Mm.390229

RefSeq Protein NP_666372

RefSeq DNA NM_146260

Description transmembrane inner ear
Experiment help page p-Value q-Value period phase
JTK 5.42e-08 3.26e-06 24.0 23.5
Lomb Scargle 1.41e-05 0.00115413 24.383 5.53
DeLichtenberg 0.0001 0.0437874 24.0 NA
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1438115_a_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_012030

Probeset 1438115_a_at

Links Wikipedia HomoloGene

Symbol Slc9a3r1

Unigene Mm.27842

RefSeq Protein NP_036160

RefSeq DNA NM_012030

Description solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1
Experiment help page p-Value q-Value period phase
JTK 5.42e-08 3.26e-06 23.0 13.5
Lomb Scargle 1.16e-05 0.00104217 22.725 20.71
DeLichtenberg 0.4363 1.0 24.0 NA
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1439096_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_027442

Probeset 1439096_at

Links Wikipedia HomoloGene

Symbol Ddo

Unigene Mm.252862

RefSeq Protein NP_081718

RefSeq DNA NM_027442

Description D-aspartate oxidase
Experiment help page p-Value q-Value period phase
JTK 5.42e-08 3.26e-06 26.0 19.0
Lomb Scargle 1.07e-05 0.000986873 25.306 1.4
DeLichtenberg 0.1141 0.783918 24.0 NA
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1438157_s_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_010907

Probeset 1438157_s_at

Links Wikipedia HomoloGene

Symbol Nfkbia

Unigene Mm.170515

RefSeq Protein NP_035037

RefSeq DNA NM_010907

Description nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha
Experiment help page p-Value q-Value period phase
JTK 5.42e-08 3.26e-06 23.0 9.5
Lomb Scargle 1.5e-05 0.00119315 23.118 16.98
DeLichtenberg 0.188 1.0 24.0 NA
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1429831_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_031376

Probeset 1429831_at

Links Wikipedia HomoloGene

Symbol Pik3ap1

Unigene Mm.222266

RefSeq Protein NP_113553

RefSeq DNA NM_031376

Description phosphoinositide-3-kinase adaptor protein 1
Experiment help page p-Value q-Value period phase
JTK 5.42e-08 3.26e-06 22.0 9.0
Lomb Scargle 8.66e-06 0.00085289 21.978 15.12
DeLichtenberg 0.0175 0.568452 24.0 NA
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1448174_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_012042

Probeset 1448174_at

Links Wikipedia HomoloGene

Symbol Cul1

Unigene Mm.87611

RefSeq Protein NP_036172

RefSeq DNA NM_012042

Description cullin 1
Experiment help page p-Value q-Value period phase
JTK 5.42e-08 3.26e-06 23.0 4.5
Lomb Scargle 3.71e-05 0.00209982 23.946 11.43
DeLichtenberg 0.9519 1.0 24.0 NA
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1451194_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_144903

Probeset 1451194_at

Links Wikipedia HomoloGene

Symbol Aldob

Unigene Mm.479534

RefSeq Protein NP_659152

RefSeq DNA NM_144903

Description aldolase B, fructose-bisphosphate
Experiment help page p-Value q-Value period phase
JTK 5.42e-08 3.26e-06 26.0 18.25
Lomb Scargle 3.82e-05 0.00213754 24.383 0.55
DeLichtenberg 0.9998 1.0 24.0 NA
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1430154_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_173028

Probeset 1430154_at

Links Wikipedia HomoloGene

Symbol Vps13a

Unigene Mm.211963

RefSeq Protein NP_766616

RefSeq DNA NM_173028

Description vacuolar protein sorting 13A (yeast)
Experiment help page p-Value q-Value period phase
JTK 5.42e-08 3.26e-06 24.0 16.0
Lomb Scargle 4.31e-05 0.00233917 23.946 22.86
DeLichtenberg 0.0221 0.568452 24.0 NA
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1421225_a_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_001136260
RNAseq_NM_001197147
RNAseq_NM_018760

Probeset 1421225_a_at

Links Wikipedia HomoloGene

Symbol Slc4a4

Unigene Mm.41044

RefSeq Protein NP_001129732   NP_001184076   NP_061230

RefSeq DNA NM_001136260
NM_001197147
NM_018760

Description solute carrier family 4 (anion exchanger), member 4
Experiment help page p-Value q-Value period phase
JTK 5.42e-08 3.26e-06 25.0 4.5
Lomb Scargle 4.95e-05 0.00257794 23.946 12.19
DeLichtenberg 0.0189 0.568452 24.0 NA
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CIRCA