CIRCA

NEWS (6/9/2014): We added two new datasets: "Mouse Macrophages" and "Mouse Heart LD"

(Examples 1451371_at 1422470_at gnf1m00037_a_at or Arntl or kinase inhibitor )
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Experiment help page
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1417066_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_001163290
RNAseq_NM_023341

Probeset 1417066_at

Links Wikipedia HomoloGene

Symbol Adck3

Unigene Mm.38330

RefSeq Protein NP_001156762   NP_075830

RefSeq DNA NM_001163290
NM_023341

Description aarF domain containing kinase 3
Experiment help page p-Value q-Value period phase
JTK 6.81e-16 5.49e-13 25.0 0.5
Lomb Scargle 9.11e-08 9.13045e-05 24.836 7.42
DeLichtenberg 0.0054 0.568452 24.0 NA
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1420760_s_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_008681

Probeset 1420760_s_at

Links Wikipedia HomoloGene

Symbol Ndrg1

Unigene Mm.30837

RefSeq Protein NP_032707

RefSeq DNA NM_008681

Description N-myc downstream regulated gene 1
Experiment help page p-Value q-Value period phase
JTK 6.81e-16 5.49e-13 25.0 2.5
Lomb Scargle 2.88e-05 0.00177689 23.946 10.26
DeLichtenberg 0.0157 0.568452 24.0 NA
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1434188_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_172838

Probeset 1434188_at

Links Wikipedia HomoloGene

Symbol Slc16a12

Unigene Mm.74636

RefSeq Protein NP_766426

RefSeq DNA NM_172838

Description solute carrier family 16 (monocarboxylic acid transporters), member 12
Experiment help page p-Value q-Value period phase
JTK 1.17e-15 9.06e-13 24.0 14.0
Lomb Scargle 1.88e-07 0.000120269 24.383 20.83
DeLichtenberg 0.0373 0.568452 24.0 NA
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1420928_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_145933

Probeset 1420928_at

Links Wikipedia HomoloGene

Symbol St6gal1

Unigene Mm.149029

RefSeq Protein NP_666045

RefSeq DNA NM_145933

Description beta galactoside alpha 2,6 sialyltransferase 1
Experiment help page p-Value q-Value period phase
JTK 1.17e-15 9.06e-13 23.0 6.5
Lomb Scargle 2.22e-07 0.00012674 23.118 12.89
DeLichtenberg 0.0339 0.568452 24.0 NA
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1437932_a_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_016674

Probeset 1437932_a_at

Links Wikipedia HomoloGene

Symbol Cldn1

Unigene Mm.289441

RefSeq Protein NP_057883

RefSeq DNA NM_016674

Description claudin 1
Experiment help page p-Value q-Value period phase
JTK 1.52e-15 1.12e-12 24.0 0.0
Lomb Scargle 8.11e-08 9.13045e-05 23.946 6.34
DeLichtenberg 0.0012 0.26926 24.0 NA
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1423844_s_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_144855
RNAseq_NM_178224

Probeset 1423844_s_at

Links Wikipedia HomoloGene

Symbol Cbs

Unigene Mm.206417

RefSeq Protein NP_659104   NP_835742

RefSeq DNA NM_144855
NM_178224

Description cystathionine beta-synthase
Experiment help page p-Value q-Value period phase
JTK 1.52e-15 1.12e-12 25.0 3.5
Lomb Scargle 3.29e-07 0.000149881 24.383 11.07
DeLichtenberg 0.0185 0.568452 24.0 NA
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1460510_a_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_001039710
RNAseq_NM_026424

Probeset 1460510_a_at

Links Wikipedia HomoloGene

Symbol Coq10b

Unigene Mm.281019

RefSeq Protein NP_001034799   NP_080700

RefSeq DNA NM_001039710
NM_026424

Description coenzyme Q10 homolog B (S. cerevisiae)
Experiment help page p-Value q-Value period phase
JTK 1.52e-15 1.12e-12 24.0 12.25
Lomb Scargle 5.47e-07 0.00017877 23.118 18.28
DeLichtenberg 0.001 0.249177 24.0 NA
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1453435_a_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_018881

Probeset 1453435_a_at

Links Wikipedia HomoloGene

Symbol Fmo2

Unigene Mm.10929

RefSeq Protein NP_061369

RefSeq DNA NM_018881

Description flavin containing monooxygenase 2
Experiment help page p-Value q-Value period phase
JTK 1.98e-15 1.42e-12 24.0 14.5
Lomb Scargle 6.95e-06 0.000753846 23.946 22.4
DeLichtenberg 0.0061 0.568452 24.0 NA
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1448231_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_010220

Probeset 1448231_at

Links Wikipedia HomoloGene

Symbol Fkbp5

Unigene Mm.276405

RefSeq Protein NP_034350

RefSeq DNA NM_010220

Description FK506 binding protein 5
Experiment help page p-Value q-Value period phase
JTK 1.98e-15 1.42e-12 24.0 14.5
Lomb Scargle 0.00215 0.0359537 24.383 19.37
DeLichtenberg 0.006 0.568452 24.0 NA
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1427347_s_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_009450

Probeset 1427347_s_at

Links Wikipedia HomoloGene

Symbol Tubb2a

Unigene Mm.469917

RefSeq Protein NP_033476

RefSeq DNA NM_009450

Description tubulin, beta 2A
Experiment help page p-Value q-Value period phase
JTK 2.57e-15 1.78e-12 25.0 23.0
Lomb Scargle 9.62e-08 9.23131e-05 24.383 6.26
DeLichtenberg 0.0001 0.0437874 24.0 NA
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1419103_a_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_025341

Probeset 1419103_a_at

Links Wikipedia HomoloGene

Symbol Abhd6

Unigene Mm.181473

RefSeq Protein NP_079617

RefSeq DNA NM_025341

Description abhydrolase domain containing 6
Experiment help page p-Value q-Value period phase
JTK 2.57e-15 1.78e-12 25.0 16.5
Lomb Scargle 1.07e-07 9.57407e-05 24.383 23.78
DeLichtenberg 0.1209 0.806018 24.0 NA
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1417981_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_133748
RNAseq_NM_178082

Probeset 1417981_at

Links Wikipedia HomoloGene

Symbol Insig2

Unigene Mm.27136

RefSeq Protein NP_598509   NP_835183

RefSeq DNA NM_133748
NM_178082

Description insulin induced gene 2
Experiment help page p-Value q-Value period phase
JTK 3.33e-15 2.18e-12 24.0 0.5
Lomb Scargle 4.04e-08 9.13045e-05 23.946 6.82
DeLichtenberg 0.0064 0.568452 24.0 NA
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1453234_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_028788

Probeset 1453234_at

Links Wikipedia HomoloGene

Symbol 1300002K09Rik

Unigene Mm.63645

RefSeq Protein NP_083064

RefSeq DNA NM_028788

Description RIKEN cDNA 1300002K09 gene
Experiment help page p-Value q-Value period phase
JTK 3.33e-15 2.18e-12 24.0 2.5
Lomb Scargle 3.26e-07 0.000149881 24.836 10.0
DeLichtenberg 0.0283 0.568452 24.0 NA
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1433691_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_016854

Probeset 1433691_at

Links Wikipedia HomoloGene

Symbol Ppp1r3c

Unigene Mm.24724

RefSeq Protein NP_058550

RefSeq DNA NM_016854

Description protein phosphatase 1, regulatory (inhibitor) subunit 3C
Experiment help page p-Value q-Value period phase
JTK 3.33e-15 2.18e-12 24.0 23.25
Lomb Scargle 6.71e-07 0.000203106 24.383 6.05
DeLichtenberg 0.0012 0.26926 24.0 NA
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1426663_s_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_001177628
RNAseq_NM_145977

Probeset 1426663_s_at

Links Wikipedia HomoloGene

Symbol Slc45a3

Unigene Mm.200307

RefSeq Protein NP_001171099   NP_666089

RefSeq DNA NM_001177628
NM_145977

Description solute carrier family 45, member 3
Experiment help page p-Value q-Value period phase
JTK 3.33e-15 2.18e-12 25.0 20.5
Lomb Scargle 1.08e-06 0.000264723 24.383 4.88
DeLichtenberg 0.0001 0.0437874 24.0 NA
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1418833_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_016702

Probeset 1418833_at

Links Wikipedia HomoloGene

Symbol Agxt

Unigene Mm.7457

RefSeq Protein NP_057911

RefSeq DNA NM_016702

Description alanine-glyoxylate aminotransferase
Experiment help page p-Value q-Value period phase
JTK 4.31e-15 2.63e-12 24.0 5.5
Lomb Scargle 1.66e-07 0.000118838 23.946 12.71
DeLichtenberg 0.0585 0.605376 24.0 NA
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1451371_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_029844

Probeset 1451371_at

Links Wikipedia HomoloGene

Symbol Mrap

Unigene Mm.22455

RefSeq Protein NP_084120

RefSeq DNA NM_029844

Description melanocortin 2 receptor accessory protein
Experiment help page p-Value q-Value period phase
JTK 4.31e-15 2.63e-12 24.0 21.0
Lomb Scargle 1.9e-07 0.000120269 24.383 5.26
DeLichtenberg 0.049 0.58548 24.0 NA
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1424620_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_178605

Probeset 1424620_at

Links Wikipedia HomoloGene

Symbol Nop16

Unigene Mm.439993

RefSeq Protein NP_848720

RefSeq DNA NM_178605

Description NOP16 nucleolar protein homolog (yeast)
Experiment help page p-Value q-Value period phase
JTK 4.31e-15 2.63e-12 26.0 18.0
Lomb Scargle 2.9e-07 0.000140638 25.306 1.82
DeLichtenberg 0.1082 0.765479 24.0 NA
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1455002_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_011200

Probeset 1455002_at

Links Wikipedia HomoloGene

Symbol Ptp4a1

Unigene Mm.478332

RefSeq Protein NP_035330

RefSeq DNA NM_011200

Description protein tyrosine phosphatase 4a1
Experiment help page p-Value q-Value period phase
JTK 4.31e-15 2.63e-12 24.0 13.5
Lomb Scargle 1.32e-06 0.000288997 23.946 19.01
DeLichtenberg 0.0285 0.568452 24.0 NA
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1436339_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NR_015608
RNAseq_NR_027875

Probeset 1436339_at

Links Wikipedia HomoloGene

Symbol 1810058I24Rik

Unigene None

RefSeq Protein None

RefSeq DNA NR_015608
NR_027875

Description RIKEN cDNA 1810058I24 gene
Experiment help page p-Value q-Value period phase
JTK 4.31e-15 2.63e-12 22.0 11.5
Lomb Scargle 3.46e-07 0.00015299 21.978 18.15
DeLichtenberg 0.0662 0.624533 24.0 NA
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CIRCA