CIRCA

NEWS (6/9/2014): We added two new datasets: "Mouse Macrophages" and "Mouse Heart LD"

(Examples 1451371_at 1422470_at gnf1m00037_a_at or Arntl or kinase inhibitor )
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1448034_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_213729

Probeset 1448034_at

Links Wikipedia HomoloGene

Symbol Inca1

Unigene Mm.101581

RefSeq Protein NP_998894

RefSeq DNA NM_213729

Description inhibitor of CDK, cyclin A1 interacting protein 1
Experiment help page p-Value q-Value period phase
JTK 7.33e-17 9.18e-14 25.0 5.0
Lomb Scargle 9.41e-08 9.2261e-05 24.383 12.41
DeLichtenberg 0.0181 0.568452 24.0 NA
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1425824_a_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_008793

Probeset 1425824_a_at

Links Wikipedia HomoloGene

Symbol Pcsk4

Unigene Mm.299916

RefSeq Protein NP_032819

RefSeq DNA NM_008793

Description proprotein convertase subtilisin/kexin type 4
Experiment help page p-Value q-Value period phase
JTK 7.33e-17 9.18e-14 24.0 12.0
Lomb Scargle 7.01e-07 0.000207999 23.525 18.12
DeLichtenberg 0.0061 0.568452 24.0 NA
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1455454_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_001013785

Probeset 1455454_at

Links Wikipedia HomoloGene

Symbol Akr1c19

Unigene Mm.22832

RefSeq Protein NP_001013807

RefSeq DNA NM_001013785

Description aldo-keto reductase family 1, member C19
Experiment help page p-Value q-Value period phase
JTK 1.3e-16 1.58e-13 24.0 14.0
Lomb Scargle 9.55e-07 0.000244724 23.525 22.18
DeLichtenberg 0.0543 0.593981 24.0 NA
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1416530_a_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_013632

Probeset 1416530_a_at

Links Wikipedia HomoloGene

Symbol Pnp

Unigene Mm.17932

RefSeq Protein NP_038660

RefSeq DNA NM_013632

Description purine-nucleoside phosphorylase
Experiment help page p-Value q-Value period phase
JTK 1.72e-16 1.85e-13 25.0 22.5
Lomb Scargle 4.81e-08 9.13045e-05 24.836 6.33
DeLichtenberg 0.0376 0.568452 24.0 NA
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1423723_s_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_001003898
RNAseq_NM_001003899
RNAseq_NM_001008545
RNAseq_NM_001008546
RNAseq_NM_145556
RNAseq_NR_027864

Probeset 1423723_s_at

Links Wikipedia HomoloGene

Symbol Tardbp

Unigene Mm.22453

RefSeq Protein NP_001003898   NP_001003899   NP_001008545   NP_001008546   NP_663531

RefSeq DNA NM_001003898
NM_001003899
NM_001008545
NM_001008546
NM_145556
NR_027864

Description TAR DNA binding protein
Experiment help page p-Value q-Value period phase
JTK 1.72e-16 1.85e-13 24.0 21.5
Lomb Scargle 6.27e-08 9.13045e-05 23.946 5.98
DeLichtenberg 0.0423 0.578713 24.0 NA
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1460348_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_027985

Probeset 1460348_at

Links Wikipedia HomoloGene

Symbol Mad2l2

Unigene Mm.9648

RefSeq Protein NP_082261

RefSeq DNA NM_027985

Description MAD2 mitotic arrest deficient-like 2 (yeast)
Experiment help page p-Value q-Value period phase
JTK 1.72e-16 1.85e-13 24.0 1.0
Lomb Scargle 7.03e-08 9.13045e-05 24.383 7.35
DeLichtenberg 0.0151 0.568452 24.0 NA
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1456174_x_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_008681

Probeset 1456174_x_at

Links Wikipedia HomoloGene

Symbol Ndrg1

Unigene Mm.30837

RefSeq Protein NP_032707

RefSeq DNA NM_008681

Description N-myc downstream regulated gene 1
Experiment help page p-Value q-Value period phase
JTK 1.72e-16 1.85e-13 24.0 3.0
Lomb Scargle 4.81e-07 0.000177816 23.525 9.93
DeLichtenberg 0.0062 0.568452 24.0 NA
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1418174_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_016974

Probeset 1418174_at

Links Wikipedia HomoloGene

Symbol Dbp

Unigene Mm.378235

RefSeq Protein NP_058670

RefSeq DNA NM_016974

Description D site albumin promoter binding protein
Experiment help page p-Value q-Value period phase
JTK 1.72e-16 1.85e-13 23.0 11.0
Lomb Scargle 2.97e-06 0.000463366 22.725 17.36
DeLichtenberg 0.0 0.0 24.0 NA
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1453299_a_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_001123371
RNAseq_NM_013632

Probeset 1453299_a_at

Links Wikipedia HomoloGene

Symbol Pnp
Pnp2

Unigene Mm.17932

RefSeq Protein NP_001116843   NP_038660

RefSeq DNA NM_001123371
NM_013632

Description purine-nucleoside phosphorylase /// purine-nucleoside phosphorylase 2
Experiment help page p-Value q-Value period phase
JTK 2.0e-16 2.09e-13 25.0 22.5
Lomb Scargle 5.93e-08 9.13045e-05 24.836 6.32
DeLichtenberg 0.0333 0.568452 24.0 NA
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1424737_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_009381

Probeset 1424737_at

Links Wikipedia HomoloGene

Symbol Thrsp

Unigene Mm.28585

RefSeq Protein NP_033407

RefSeq DNA NM_009381

Description thyroid hormone responsive SPOT14 homolog (Rattus)
Experiment help page p-Value q-Value period phase
JTK 2.27e-16 2.23e-13 23.0 16.5
Lomb Scargle 4.03e-08 9.13045e-05 23.525 23.78
DeLichtenberg 0.0083 0.568452 24.0 NA
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1417203_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_023154

Probeset 1417203_at

Links Wikipedia HomoloGene

Symbol Ethe1

Unigene Mm.29553

RefSeq Protein NP_075643

RefSeq DNA NM_023154

Description ethylmalonic encephalopathy 1
Experiment help page p-Value q-Value period phase
JTK 2.27e-16 2.23e-13 25.5 0.5
Lomb Scargle 5.45e-08 9.13045e-05 25.306 7.68
DeLichtenberg 0.0265 0.568452 24.0 NA
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1419024_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_011200

Probeset 1419024_at

Links Wikipedia HomoloGene

Symbol Ptp4a1

Unigene Mm.478332

RefSeq Protein NP_035330

RefSeq DNA NM_011200

Description protein tyrosine phosphatase 4a1
Experiment help page p-Value q-Value period phase
JTK 2.27e-16 2.23e-13 24.0 14.0
Lomb Scargle 4.25e-07 0.000161075 23.946 21.43
DeLichtenberg 0.0241 0.568452 24.0 NA
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1425099_a_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_007489

Probeset 1425099_a_at

Links Wikipedia HomoloGene

Symbol Arntl

Unigene Mm.440371

RefSeq Protein NP_031515

RefSeq DNA NM_007489

Description aryl hydrocarbon receptor nuclear translocator-like
Experiment help page p-Value q-Value period phase
JTK 3.0e-16 2.71e-13 24.5 22.5
Lomb Scargle 2.58e-08 9.13045e-05 24.383 5.97
DeLichtenberg 0.0 0.0 24.0 NA
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1435749_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_010266

Probeset 1435749_at

Links Wikipedia HomoloGene

Symbol Gda

Unigene Mm.45054

RefSeq Protein NP_034396

RefSeq DNA NM_010266

Description guanine deaminase
Experiment help page p-Value q-Value period phase
JTK 3.0e-16 2.71e-13 23.0 18.0
Lomb Scargle 4.18e-08 9.13045e-05 23.118 23.81
DeLichtenberg 0.0655 0.624533 24.0 NA
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1451313_a_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_173752

Probeset 1451313_a_at

Links Wikipedia HomoloGene

Symbol 1110067D22Rik

Unigene Mm.76694

RefSeq Protein NP_776113

RefSeq DNA NM_173752

Description RIKEN cDNA 1110067D22 gene
Experiment help page p-Value q-Value period phase
JTK 3.0e-16 2.71e-13 23.0 23.0
Lomb Scargle 1.89e-07 0.000120269 23.118 5.81
DeLichtenberg 0.0002 0.0798248 24.0 NA
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1431012_a_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_001110331
RNAseq_NM_001110332
RNAseq_NM_011868

Probeset 1431012_a_at

Links Wikipedia HomoloGene

Symbol Peci

Unigene Mm.28883

RefSeq Protein NP_001103801   NP_001103802   NP_035998

RefSeq DNA NM_001110331
NM_001110332
NM_011868

Description peroxisomal delta3, delta2-enoyl-Coenzyme A isomerase
Experiment help page p-Value q-Value period phase
JTK 3.0e-16 2.71e-13 24.0 12.0
Lomb Scargle 4.11e-07 0.000161075 23.946 18.27
DeLichtenberg 0.1109 0.77318 24.0 NA
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1435084_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq None

Probeset 1435084_at

Links Wikipedia HomoloGene

Symbol C730049O14Rik

Unigene None

RefSeq Protein None

RefSeq DNA None

Description RIKEN cDNA C730049O14 gene
Experiment help page p-Value q-Value period phase
JTK 3.95e-16 3.43e-13 25.0 0.5
Lomb Scargle 4.83e-08 9.13045e-05 24.383 6.98
DeLichtenberg 0.006 0.568452 24.0 NA
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1438211_s_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_016974

Probeset 1438211_s_at

Links Wikipedia HomoloGene

Symbol Dbp

Unigene Mm.378235

RefSeq Protein NP_058670

RefSeq DNA NM_016974

Description D site albumin promoter binding protein
Experiment help page p-Value q-Value period phase
JTK 3.95e-16 3.43e-13 24.0 10.0
Lomb Scargle 3.88e-06 0.000540098 22.725 17.24
DeLichtenberg 0.0 0.0 24.0 NA
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1448276_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_053082

Probeset 1448276_at

Links Wikipedia HomoloGene

Symbol Tspan4

Unigene Mm.245355

RefSeq Protein NP_444312

RefSeq DNA NM_053082

Description tetraspanin 4
Experiment help page p-Value q-Value period phase
JTK 5.2e-16 4.34e-13 24.0 16.0
Lomb Scargle 8.45e-08 9.13045e-05 23.946 23.45
DeLichtenberg 0.0259 0.568452 24.0 NA
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1452257_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_001122683
RNAseq_NM_175177

Probeset 1452257_at

Links Wikipedia HomoloGene

Symbol Bdh1

Unigene Mm.293470

RefSeq Protein NP_001116155   NP_780386

RefSeq DNA NM_001122683
NM_175177

Description 3-hydroxybutyrate dehydrogenase, type 1
Experiment help page p-Value q-Value period phase
JTK 5.2e-16 4.34e-13 22.0 10.0
Lomb Scargle 1.49e-07 0.000113899 21.623 17.39
DeLichtenberg 0.5115 1.0 24.0 NA
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CIRCA