CIRCA: Circadian gene expression profiles.

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(Examples 1451371_at 1422470_at gnf1m00037_a_at or Arntl or kinase inhibitor )

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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001081684 RNAseq_NM_001081685 RNAseq_NM_175428 Probeset 1441973_at Links Wikipedia HomoloGene Symbol Zfp295 Unigene None RefSeq Protein NP_001075153 NP_001075154 NP_780637 RefSeq DNA NM_001081684 NM_001081685 NM_175428 Description zinc finger protein 295
	p-Value	q-Value	period	phase
JTK	1.11e-09	1.17e-07	23.0	22.0
Lomb Scargle	1.5e-05	0.00119315	22.345	4.87
DeLichtenberg	0.0271	0.568452	24.0	NA
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			Experiment Mouse NIH 3T3 Immortilized Cell Line 48 hour Hughes 2009 (Affymetrix) Probeset 1417303_at Links Wikipedia HomoloGene Symbol Mvd Unigene Mm.28146 RefSeq Protein NP_619597 RefSeq DNA NM_138656 NR_028354 Description mevalonate (diphospho) decarboxylase
	p-Value	q-Value	period	phase
JTK	1.57e-11	1.18e-07	42.0	22.5
Lomb Scargle	3.88e-05	0.0681347	42.0	5.72
DeLichtenberg	0.017	0.304132	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_026633 Probeset 1417212_at Links Wikipedia HomoloGene Symbol Fam195a Unigene Mm.328870 RefSeq Protein NP_080909 RefSeq DNA NM_026633 Description family with sequence similarity 195, member A
	p-Value	q-Value	period	phase
JTK	1.21e-09	1.24e-07	25.0	17.0
Lomb Scargle	8.49e-07	0.000232065	23.525	23.68
DeLichtenberg	0.0829	0.681731	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_008300 Probeset 1416146_at Links Wikipedia HomoloGene Symbol Hspa4 Unigene Mm.239865 RefSeq Protein NP_032326 RefSeq DNA NM_008300 Description heat shock protein 4
	p-Value	q-Value	period	phase
JTK	1.21e-09	1.24e-07	23.0	8.5
Lomb Scargle	1.52e-06	0.000311607	22.725	15.83
DeLichtenberg	0.5238	1.0	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_139295 RNAseq_NM_176808 Probeset 1424024_at Links Wikipedia HomoloGene Symbol Mcfd2 Unigene Mm.30251 RefSeq Protein NP_647456 NP_789778 RefSeq DNA NM_139295 NM_176808 Description multiple coagulation factor deficiency 2
	p-Value	q-Value	period	phase
JTK	1.21e-09	1.24e-07	26.0	20.5
Lomb Scargle	2.89e-06	0.000462205	25.306	5.55
DeLichtenberg	0.5952	1.0	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_134255 Probeset 1437211_x_at Links Wikipedia HomoloGene Symbol Elovl5 Unigene Mm.430736 RefSeq Protein NP_599016 RefSeq DNA NM_134255 Description ELOVL family member 5, elongation of long chain fatty acids (yeast)
	p-Value	q-Value	period	phase
JTK	1.21e-09	1.24e-07	24.0	2.5
Lomb Scargle	4.9e-06	0.000616841	24.383	9.83
DeLichtenberg	0.0211	0.568452	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001111289 RNAseq_NM_001111290 RNAseq_NM_001111291 RNAseq_NM_001111292 RNAseq_NM_016739 RNAseq_XR_106078 Probeset 1448347_a_at Links Wikipedia HomoloGene Symbol Caprin1 LOC100504494 Unigene Mm.427589 RefSeq Protein NP_001104759 NP_001104760 NP_001104761 NP_001104762 NP_058019 RefSeq DNA NM_001111289 NM_001111290 NM_001111291 NM_001111292 NM_016739 XR_106078 Description cell cycle associated protein 1 /// hypothetical LOC100504494
	p-Value	q-Value	period	phase
JTK	1.21e-09	1.24e-07	23.0	0.5
Lomb Scargle	3.3e-06	0.000497306	22.345	5.92
DeLichtenberg	0.113	0.779481	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_009474 Probeset 1422604_at Links Wikipedia HomoloGene Symbol Uox Unigene Mm.10865 RefSeq Protein NP_033500 RefSeq DNA NM_009474 Description urate oxidase
	p-Value	q-Value	period	phase
JTK	1.21e-09	1.24e-07	26.0	13.0
Lomb Scargle	1.12e-05	0.00101841	23.946	19.65
DeLichtenberg	0.9957	1.0	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_016690 Probeset 1449039_a_at Links Wikipedia HomoloGene Symbol Hnrpdl Unigene Mm.426680 RefSeq Protein NP_057899 RefSeq DNA NM_016690 Description heterogeneous nuclear ribonucleoprotein D-like
	p-Value	q-Value	period	phase
JTK	1.21e-09	1.24e-07	21.0	10.0
Lomb Scargle	1.97e-06	0.000371753	21.623	16.14
DeLichtenberg	0.0881	0.69819	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_023721 Probeset 1416951_a_at Links Wikipedia HomoloGene Symbol Atp6v1d Unigene Mm.479544 RefSeq Protein NP_076210 RefSeq DNA NM_023721 Description ATPase, H+ transporting, lysosomal V1 subunit D
	p-Value	q-Value	period	phase
JTK	1.21e-09	1.24e-07	24.0	15.0
Lomb Scargle	2.56e-05	0.00166848	24.383	23.92
DeLichtenberg	0.0708	0.642097	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_008828 Probeset 1417864_at Links Wikipedia HomoloGene Symbol Pgk1 Unigene Mm.336205 RefSeq Protein NP_032854 RefSeq DNA NM_008828 Description phosphoglycerate kinase 1
	p-Value	q-Value	period	phase
JTK	1.21e-09	1.24e-07	24.0	20.0
Lomb Scargle	7.39e-05	0.0033906	23.525	4.1
DeLichtenberg	0.9815	1.0	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_175036 Probeset 1424438_a_at Links Wikipedia HomoloGene Symbol Leprot Unigene Mm.4756 RefSeq Protein NP_778201 RefSeq DNA NM_175036 Description leptin receptor overlapping transcript
	p-Value	q-Value	period	phase
JTK	1.21e-09	1.24e-07	26.0	4.5
Lomb Scargle	0.000127	0.00486233	25.794	12.04
DeLichtenberg	0.5418	1.0	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_133726 Probeset 1460193_at Links Wikipedia HomoloGene Symbol St13 Unigene Mm.180337 RefSeq Protein NP_598487 RefSeq DNA NM_133726 Description suppression of tumorigenicity 13
	p-Value	q-Value	period	phase
JTK	1.21e-09	1.24e-07	29.0	20.5
Lomb Scargle	4.08e-06	0.000555298	28.548	3.33
DeLichtenberg	0.6002	1.0	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001160163 RNAseq_NM_001160164 RNAseq_NM_001160165 RNAseq_NM_015750 Probeset 1431936_a_at Links Wikipedia HomoloGene Symbol Neu2 Unigene Mm.143717 RefSeq Protein NP_001153635 NP_001153636 NP_001153637 NP_056565 RefSeq DNA NM_001160163 NM_001160164 NM_001160165 NM_015750 Description neuraminidase 2
	p-Value	q-Value	period	phase
JTK	1.33e-09	1.36e-07	24.0	19.5
Lomb Scargle	0.00173	0.0305381	24.836	0.77
DeLichtenberg	0.0588	0.605376	24.0	NA
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			Experiment Mouse Pituitary 48 hour Hughes 2009 (Affymetrix) Probeset 1416953_at Links Wikipedia HomoloGene Symbol Ctgf Unigene Mm.390287 RefSeq Protein NP_034347 RefSeq DNA NM_010217 Description connective tissue growth factor
	p-Value	q-Value	period	phase
JTK	6.3e-11	1.42e-07	24.0	12.5
Lomb Scargle	3.39e-06	0.00818939	23.525	18.71
DeLichtenberg	0.0516	0.389622	24.0	NA
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			Experiment Mouse Pituitary 48 hour Hughes 2009 (Affymetrix) Probeset 1436569_at Links Wikipedia HomoloGene Symbol Prex2 Unigene Mm.123247 RefSeq Protein NP_001028808 NP_083801 RefSeq DNA NM_001033636 NM_029525 Description phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
	p-Value	q-Value	period	phase
JTK	6.3e-11	1.42e-07	24.0	13.5
Lomb Scargle	2.77e-06	0.00818939	23.946	19.04
DeLichtenberg	0.1388	0.780065	24.0	NA
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			Experiment Mouse Pituitary 48 hour Hughes 2009 (Affymetrix) Probeset 1438862_at Links Wikipedia HomoloGene Symbol None Unigene Mm.441560 RefSeq Protein None RefSeq DNA None Description ---
	p-Value	q-Value	period	phase
JTK	5.74e-11	1.42e-07	24.0	23.5
Lomb Scargle	0.000111	0.0618238	23.946	6.22
DeLichtenberg	0.0	0.0	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_025279 Probeset 1423684_at Links Wikipedia HomoloGene Symbol Hnrnpk Unigene Mm.142872 RefSeq Protein NP_079555 RefSeq DNA NM_025279 Description heterogeneous nuclear ribonucleoprotein K
	p-Value	q-Value	period	phase
JTK	1.44e-09	1.46e-07	25.0	6.5
Lomb Scargle	8.27e-07	0.000231668	24.836	12.65
DeLichtenberg	0.4174	1.0	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_008910 Probeset 1415678_at Links Wikipedia HomoloGene Symbol Ppm1a Unigene Mm.261045 RefSeq Protein NP_032936 RefSeq DNA NM_008910 Description protein phosphatase 1A, magnesium dependent, alpha isoform
	p-Value	q-Value	period	phase
JTK	1.44e-09	1.46e-07	24.0	10.5
Lomb Scargle	2.55e-06	0.000419736	23.946	17.61
DeLichtenberg	0.5626	1.0	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_053200 Probeset 1449081_at Links Wikipedia HomoloGene Symbol Ces1d Unigene Mm.292803 RefSeq Protein NP_444430 RefSeq DNA NM_053200 Description carboxylesterase 1D
	p-Value	q-Value	period	phase
JTK	1.44e-09	1.46e-07	25.0	18.5
Lomb Scargle	4.15e-06	0.000555398	24.383	0.26
DeLichtenberg	0.2694	1.0	24.0	NA
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