CIRCA: Circadian gene expression profiles.

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(Examples 1451371_at 1422470_at gnf1m00037_a_at or Arntl or kinase inhibitor )

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			Experiment Mouse 1.OST Liver (Affymetrix) UCSC RNAseq RNAseq_NM_013490 RNAseq_NM_001025566 Probeset 10460221 Links Wikipedia HomoloGene Symbol Chka Unigene Mm.225505 RefSeq Protein None RefSeq DNA NM_013490 NM_001025566 Description choline kinase alpha
	p-Value	q-Value	period	phase
JTK	2.33066e-12	8.2869e-08	24.0	22.0
Lomb Scargle	0.000346	0.173327	23.064	21.94
DeLichtenberg	0.0903	0.831789	24.0	NA
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			Experiment Mouse Wild Type Muscle (GNF microarray) Probeset gnf1m13068_a_at Links Wikipedia HomoloGene Symbol Nfil3 Unigene Mm.136604 RefSeq Protein None RefSeq DNA NM_017373 Description nuclear factor, interleukin 3, regulated
	p-Value	q-Value	period	phase
JTK	0.00102508	8.5e-08	24.0	20.0
Lomb Scargle	0.00238	1.0	23.812	2.61
DeLichtenberg	0.0002	0.0709451	24.0	NA
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			Experiment Mouse Pituitary 48 hour Hughes 2009 (Affymetrix) Probeset 1457350_at Links Wikipedia HomoloGene Symbol Per2 Unigene Mm.218141 RefSeq Protein NP_035196 RefSeq DNA NM_011066 Description period homolog 2 (Drosophila)
	p-Value	q-Value	period	phase
JTK	2.87e-11	8.64e-08	24.0	15.0
Lomb Scargle	0.021	1.0	23.946	22.95
DeLichtenberg	0.0	0.0	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_029609 Probeset 1452889_at Links Wikipedia HomoloGene Symbol Lhpp Unigene Mm.276721 RefSeq Protein NP_083885 RefSeq DNA NM_029609 Description phospholysine phosphohistidine inorganic pyrophosphate phosphatase
	p-Value	q-Value	period	phase
JTK	8.5e-10	9.3e-08	23.5	10.0
Lomb Scargle	1.24e-06	0.000277716	23.946	17.15
DeLichtenberg	0.0768	0.667359	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001033259 Probeset 1453166_at Links Wikipedia HomoloGene Symbol Ccdc109a Unigene Mm.296470 RefSeq Protein NP_001028431 RefSeq DNA NM_001033259 Description coiled-coil domain containing 109A
	p-Value	q-Value	period	phase
JTK	8.5e-10	9.3e-08	24.0	3.5
Lomb Scargle	2.44e-06	0.000414397	24.383	10.82
DeLichtenberg	0.0426	0.578713	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_011020 Probeset 1418253_a_at Links Wikipedia HomoloGene Symbol Hspa4l Unigene Mm.39330 RefSeq Protein NP_035150 RefSeq DNA NM_011020 Description heat shock protein 4 like
	p-Value	q-Value	period	phase
JTK	8.5e-10	9.3e-08	24.5	19.5
Lomb Scargle	2.49e-06	0.000414397	24.836	1.19
DeLichtenberg	0.0107	0.568452	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_025661 Probeset 1419450_at Links Wikipedia HomoloGene Symbol Ormdl3 Unigene Mm.180546 RefSeq Protein NP_079937 RefSeq DNA NM_025661 Description ORM1-like 3 (S. cerevisiae)
	p-Value	q-Value	period	phase
JTK	8.5e-10	9.3e-08	26.0	20.5
Lomb Scargle	1.34e-06	0.000289164	25.794	5.68
DeLichtenberg	0.1504	0.897722	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_008878 Probeset 1417498_at Links Wikipedia HomoloGene Symbol Serpinf2 Unigene Mm.279733 RefSeq Protein NP_032904 RefSeq DNA NM_008878 Description serine (or cysteine) peptidase inhibitor, clade F, member 2
	p-Value	q-Value	period	phase
JTK	8.5e-10	9.3e-08	25.0	4.5
Lomb Scargle	8.11e-06	0.0008277	24.383	11.13
DeLichtenberg	0.0579	0.605376	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_011693 Probeset 1415989_at Links Wikipedia HomoloGene Symbol Vcam1 Unigene Mm.76649 RefSeq Protein NP_035823 RefSeq DNA NM_011693 Description vascular cell adhesion molecule 1
	p-Value	q-Value	period	phase
JTK	8.5e-10	9.3e-08	26.0	15.0
Lomb Scargle	6.97e-06	0.000753846	25.306	23.45
DeLichtenberg	0.0267	0.568452	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001097979 RNAseq_NM_001110555 RNAseq_NM_001177653 RNAseq_NM_023422 RNAseq_NM_178194 RNAseq_NM_178199 RNAseq_NM_178200 RNAseq_NM_178202 Probeset 1452540_a_at Links Wikipedia HomoloGene Symbol Gm11277 Gm13646 Hist1h2bc Hist1h2be Hist1h2bl Hist1h2bm Hist1h2bp Unigene Mm.261676 RefSeq Protein NP_001091448 NP_001104025 NP_001171124 NP_075911 NP_835501 NP_835506 NP_835507 NP_835509 RefSeq DNA NM_001097979 NM_001110555 NM_001177653 NM_023422 NM_178194 NM_178199 NM_178200 NM_178202 Description predicted gene 11277 /// predicted gene 13646 /// histone cluster 1, H2bc /// histone cluster 1, H2be /// histone cluster 1, H2bl /// histone cluster 1, H2bm /// histone cluster 1, H2bp
	p-Value	q-Value	period	phase
JTK	8.5e-10	9.3e-08	25.6667	20.5
Lomb Scargle	1.14e-05	0.00102625	24.836	5.39
DeLichtenberg	0.7359	1.0	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_175105 Probeset 1429254_at Links Wikipedia HomoloGene Symbol Aqp11 Unigene Mm.29756 RefSeq Protein NP_780314 RefSeq DNA NM_175105 Description aquaporin 11
	p-Value	q-Value	period	phase
JTK	8.5e-10	9.3e-08	24.0	15.0
Lomb Scargle	1.62e-05	0.00125972	23.946	22.63
DeLichtenberg	0.1486	0.893839	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001111100 RNAseq_NM_021460 Probeset 1423141_at Links Wikipedia HomoloGene Symbol Lipa Unigene Mm.157545 RefSeq Protein NP_001104570 NP_067435 RefSeq DNA NM_001111100 NM_021460 Description lysosomal acid lipase A
	p-Value	q-Value	period	phase
JTK	8.5e-10	9.3e-08	28.0	21.0
Lomb Scargle	1.25e-06	0.000277716	28.548	6.96
DeLichtenberg	0.0138	0.568452	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001177980 RNAseq_NM_001177981 RNAseq_NM_001177982 RNAseq_NM_001177983 RNAseq_NM_019840 Probeset 1422474_at Links Wikipedia HomoloGene Symbol Pde4b Unigene Mm.20181 RefSeq Protein NP_001171451 NP_001171452 NP_001171453 NP_001171454 NP_062814 RefSeq DNA NM_001177980 NM_001177981 NM_001177982 NM_001177983 NM_019840 Description phosphodiesterase 4B, cAMP specific
	p-Value	q-Value	period	phase
JTK	8.5e-10	9.3e-08	25.0	3.5
Lomb Scargle	2.45e-05	0.00161546	24.836	11.38
DeLichtenberg	0.0147	0.568452	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_025994 Probeset 1437478_s_at Links Wikipedia HomoloGene Symbol Efhd2 Unigene Mm.395598 RefSeq Protein NP_080270 RefSeq DNA NM_025994 Description EF hand domain containing 2
	p-Value	q-Value	period	phase
JTK	8.5e-10	9.3e-08	23.0	12.5
Lomb Scargle	2.73e-05	0.00171963	23.118	18.19
DeLichtenberg	0.0221	0.568452	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_144919 Probeset 1454803_a_at Links Wikipedia HomoloGene Symbol Hdac11 Unigene Mm.206218 RefSeq Protein NP_659168 RefSeq DNA NM_144919 Description histone deacetylase 11
	p-Value	q-Value	period	phase
JTK	8.5e-10	9.3e-08	24.0	7.0
Lomb Scargle	6.87e-05	0.00321749	23.118	13.7
DeLichtenberg	0.0642	0.623758	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001081176 Probeset 1449155_at Links Wikipedia HomoloGene Symbol Polr3g Unigene Mm.279781 RefSeq Protein NP_001074645 RefSeq DNA NM_001081176 Description polymerase (RNA) III (DNA directed) polypeptide G
	p-Value	q-Value	period	phase
JTK	8.5e-10	9.3e-08	23.0	19.5
Lomb Scargle	8.2e-05	0.00362577	23.525	0.22
DeLichtenberg	0.2862	1.0	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001039175 RNAseq_NM_001039176 RNAseq_NM_019422 Probeset 1455994_x_at Links Wikipedia HomoloGene Symbol Elovl1 Unigene Mm.282096 RefSeq Protein NP_001034264 NP_001034265 NP_062295 RefSeq DNA NM_001039175 NM_001039176 NM_019422 Description elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1
	p-Value	q-Value	period	phase
JTK	8.5e-10	9.3e-08	27.0	18.5
Lomb Scargle	2.14e-05	0.00148715	26.302	4.31
DeLichtenberg	0.0603	0.612796	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001111065 RNAseq_NM_009048 Probeset 1440822_x_at Links Wikipedia HomoloGene Symbol Reps1 Unigene Mm.4479 RefSeq Protein NP_001104535 NP_033074 RefSeq DNA NM_001111065 NM_009048 Description RalBP1 associated Eps domain containing protein
	p-Value	q-Value	period	phase
JTK	8.5e-10	9.3e-08	23.0	6.5
Lomb Scargle	3.41e-05	0.00199733	21.978	13.47
DeLichtenberg	0.0502	0.587162	24.0	NA
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			Experiment Mouse 1.OST Liver (Affymetrix) UCSC RNAseq RNAseq_NM_053097 RNAseq_NM_001037842 Probeset 10545869 Links Wikipedia HomoloGene Symbol Cml3 Unigene Mm.479603 RefSeq Protein None RefSeq DNA NM_053097 NM_001037842 Description camello-like 3
	p-Value	q-Value	period	phase
JTK	5.51165e-12	9.79862e-08	24.0	17.0
Lomb Scargle	0.00121	0.173327	23.892	16.48
DeLichtenberg	0.2074	1.0	24.0	NA
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			Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix) UCSC RNAseq RNAseq_NM_001085493 Probeset 1429213_at Links Wikipedia HomoloGene Symbol 2310030N02Rik Unigene Mm.275265 RefSeq Protein NP_001078962 RefSeq DNA NM_001085493 Description RIKEN cDNA 2310030N02 gene
	p-Value	q-Value	period	phase
JTK	9.33e-10	1.02e-07	24.0	14.25
Lomb Scargle	1.07e-05	0.000986873	23.946	23.19
DeLichtenberg	0.5163	1.0	24.0	NA
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