CIRCA

NEWS (9/12/2018): We added human tissues to the database

(Examples 1451371_at 1422470_at gnf1m00037_a_at or Arntl or kinase inhibitor )
Query syntax mode: Query help page

("0.5" or "2e-10")
("0-6" or "10.30-11.10")
Output mode
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Experiment help page
(If nothing is selected, CIRCA will search all experiments.)

Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_025934

Probeset 1440381_at

Links Wikipedia HomoloGene

Symbol Riok2

Unigene Mm.35117

RefSeq Protein NP_080210

RefSeq DNA NM_025934

Description RIO kinase 2 (yeast)
Experiment help page p-Value q-Value period phase
JTK 5.18e-11 8.38e-09 23.5 15.0
Lomb Scargle 1.71e-06 0.000341251 23.946 23.29
DeLichtenberg 0.025 0.568452 24.0 NA
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Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_001025566
RNAseq_NM_013490

Probeset 1453582_at

Links Wikipedia HomoloGene

Symbol Chka

Unigene Mm.225505

RefSeq Protein NP_001020737   NP_038518

RefSeq DNA NM_001025566
NM_013490

Description choline kinase alpha
Experiment help page p-Value q-Value period phase
JTK 5.18e-11 8.38e-09 24.0 22.0
Lomb Scargle 3.7e-06 0.000526415 23.946 5.97
DeLichtenberg 0.0 0.0 24.0 NA
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Experiment Mouse NIH 3T3 Immortilized Cell Line 48 hour Hughes 2009 (Affymetrix)

Probeset 1417602_at

Links Wikipedia HomoloGene

Symbol Per2

Unigene Mm.218141

RefSeq Protein NP_035196

RefSeq DNA NM_011066

Description period homolog 2 (Drosophila)
Experiment help page p-Value q-Value period phase
JTK 8.15e-13 9.19e-09 23.0 3.0
Lomb Scargle 1.42e-06 0.0160109 23.118 5.89
DeLichtenberg 0.0041 0.162885 24.0 NA
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Experiment Mouse 1.OST Lung (Affymetrix)

UCSC RNAseq RNAseq_NM_009516

Probeset 10556266

Links Wikipedia HomoloGene

Symbol Wee1

Unigene Mm.287173

RefSeq Protein None

RefSeq DNA NM_009516

Description WEE 1 homolog 1 (S. pombe)
Experiment help page p-Value q-Value period phase
JTK 2.33066e-12 9.20767e-09 24.0 13.0
Lomb Scargle 0.000387 0.307798 23.892 11.31
DeLichtenberg 0.5994 1.0 24.0 NA
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Experiment Mouse 1.OST Lung (Affymetrix)

UCSC RNAseq RNAseq_NM_011584

Probeset 10417734

Links Wikipedia HomoloGene

Symbol Nr1d2

Unigene Mm.26587

RefSeq Protein None

RefSeq DNA NM_011584

Description nuclear receptor subfamily 1, group D, member 2
Experiment help page p-Value q-Value period phase
JTK 2.33066e-12 9.20767e-09 24.0 10.0
Lomb Scargle 0.000315 0.307798 23.064 9.9
DeLichtenberg 0.0986 1.0 24.0 NA
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Experiment Mouse 1.OST Lung (Affymetrix)

UCSC RNAseq RNAseq_NM_011281

Probeset 10494023

Links Wikipedia HomoloGene

Symbol Rorc

Unigene Mm.4372

RefSeq Protein None

RefSeq DNA NM_011281

Description RAR-related orphan receptor gamma
Experiment help page p-Value q-Value period phase
JTK 2.33066e-12 9.20767e-09 24.0 17.0
Lomb Scargle 0.000328 0.307798 23.892 16.19
DeLichtenberg 0.6071 1.0 24.0 NA
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Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_139297

Probeset 1434486_x_at

Links Wikipedia HomoloGene

Symbol Ugp2

Unigene Mm.28877

RefSeq Protein NP_647458

RefSeq DNA NM_139297

Description UDP-glucose pyrophosphorylase 2
Experiment help page p-Value q-Value period phase
JTK 6.3e-11 9.82e-09 26.0 11.5
Lomb Scargle 3.71e-07 0.000157443 25.794 18.0
DeLichtenberg 0.389 1.0 24.0 NA
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Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_019971

Probeset 1449351_s_at

Links Wikipedia HomoloGene

Symbol Pdgfc

Unigene Mm.331089

RefSeq Protein NP_064355

RefSeq DNA NM_019971

Description platelet-derived growth factor, C polypeptide
Experiment help page p-Value q-Value period phase
JTK 6.3e-11 9.82e-09 24.0 0.5
Lomb Scargle 1.15e-06 0.000268737 23.525 6.38
DeLichtenberg 0.0299 0.568452 24.0 NA
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Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_013851

Probeset 1427546_at

Links Wikipedia HomoloGene

Symbol Abca8b

Unigene Mm.341004

RefSeq Protein NP_038879

RefSeq DNA NM_013851

Description ATP-binding cassette, sub-family A (ABC1), member 8b
Experiment help page p-Value q-Value period phase
JTK 6.3e-11 9.82e-09 23.0 5.0
Lomb Scargle 2.05e-06 0.000378922 23.946 11.21
DeLichtenberg 0.0614 0.615059 24.0 NA
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Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_008180

Probeset 1448273_at

Links Wikipedia HomoloGene

Symbol Gss

Unigene Mm.252316

RefSeq Protein NP_032206

RefSeq DNA NM_008180

Description glutathione synthetase
Experiment help page p-Value q-Value period phase
JTK 6.3e-11 9.82e-09 23.0 11.5
Lomb Scargle 2.47e-06 0.000414397 23.525 17.94
DeLichtenberg 0.1561 0.911361 24.0 NA
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Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_145497

Probeset 1447503_at

Links Wikipedia HomoloGene

Symbol BC016495

Unigene Mm.211595

RefSeq Protein NP_663472

RefSeq DNA NM_145497

Description cDNA sequence BC016495
Experiment help page p-Value q-Value period phase
JTK 6.3e-11 9.82e-09 24.0 14.0
Lomb Scargle 2.25e-06 0.00039795 24.836 21.15
DeLichtenberg 0.0161 0.568452 24.0 NA
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Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_001044389
RNAseq_NM_011802

Probeset 1439342_at

Links Wikipedia HomoloGene

Symbol Clpx

Unigene Mm.30088

RefSeq Protein NP_001037854   NP_035932

RefSeq DNA NM_001044389
NM_011802

Description Caseinolytic peptidase X (E.coli)
Experiment help page p-Value q-Value period phase
JTK 6.3e-11 9.82e-09 23.0 22.5
Lomb Scargle 8.13e-06 0.0008277 23.946 5.83
DeLichtenberg 0.0001 0.0437874 24.0 NA
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Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_011851

Probeset 1428547_at

Links Wikipedia HomoloGene

Symbol Nt5e

Unigene Mm.244235

RefSeq Protein NP_035981

RefSeq DNA NM_011851

Description 5' nucleotidase, ecto
Experiment help page p-Value q-Value period phase
JTK 6.3e-11 9.82e-09 27.0 21.5
Lomb Scargle 1.05e-06 0.000260198 27.379 6.63
DeLichtenberg 0.0231 0.568452 24.0 NA
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Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_001001309

Probeset 1454966_at

Links Wikipedia HomoloGene

Symbol Itga8

Unigene Mm.329997

RefSeq Protein NP_001001309

RefSeq DNA NM_001001309

Description integrin alpha 8
Experiment help page p-Value q-Value period phase
JTK 6.3e-11 9.82e-09 26.0 4.5
Lomb Scargle 1.24e-05 0.00107964 25.306 11.9
DeLichtenberg 0.0215 0.568452 24.0 NA
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Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_145478

Probeset 1451069_at

Links Wikipedia HomoloGene

Symbol Pim3

Unigene Mm.400129

RefSeq Protein NP_663453

RefSeq DNA NM_145478

Description proviral integration site 3
Experiment help page p-Value q-Value period phase
JTK 6.3e-11 9.82e-09 23.0 12.0
Lomb Scargle 2.09e-05 0.00145689 22.725 18.0
DeLichtenberg 0.0084 0.568452 24.0 NA
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Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_001003960
RNAseq_NM_001003961
RNAseq_NM_001003963
RNAseq_NM_001122997
RNAseq_NM_010068

Probeset 1449052_a_at

Links Wikipedia HomoloGene

Symbol Dnmt3b

Unigene Mm.89772

RefSeq Protein NP_001003960   NP_001003961   NP_001003963   NP_001116469   NP_034198

RefSeq DNA NM_001003960
NM_001003961
NM_001003963
NM_001122997
NM_010068

Description DNA methyltransferase 3B
Experiment help page p-Value q-Value period phase
JTK 6.3e-11 9.82e-09 24.0 22.5
Lomb Scargle 0.00013 0.00494362 23.525 6.01
DeLichtenberg 0.0056 0.568452 24.0 NA
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Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_009450

Probeset 1427838_at

Links Wikipedia HomoloGene

Symbol Tubb2a

Unigene Mm.469917

RefSeq Protein NP_033476

RefSeq DNA NM_009450

Description tubulin, beta 2A
Experiment help page p-Value q-Value period phase
JTK 6.97e-11 1.08e-08 24.0 0.0
Lomb Scargle 6.14e-06 0.000699293 23.525 6.45
DeLichtenberg 0.0053 0.568452 24.0 NA
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Experiment Human U2 OS Hughes 2009 (Affymetrix)

Probeset 7897378

Links Wikipedia HomoloGene

Symbol PER3

Unigene Hs.162200

RefSeq Protein None

RefSeq DNA NM_016831

Description period homolog 3 (Drosophila)
Experiment help page p-Value q-Value period phase
JTK 1.02e-12 1.13e-08 24.0 11.0
Lomb Scargle 4.43e-07 0.00491686 23.525 11.76
DeLichtenberg 0.0062 0.0872902 24.0 NA
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Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_145564

Probeset 1452828_at

Links Wikipedia HomoloGene

Symbol Fbxo21

Unigene Mm.21912

RefSeq Protein NP_663539

RefSeq DNA NM_145564

Description F-box protein 21
Experiment help page p-Value q-Value period phase
JTK 7.64e-11 1.15e-08 24.0 6.25
Lomb Scargle 9.19e-07 0.000240976 23.118 13.4
DeLichtenberg 0.001 0.249177 24.0 NA
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Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_177343

Probeset 1452050_at

Links Wikipedia HomoloGene

Symbol Camk1d

Unigene Mm.191949

RefSeq Protein NP_796317

RefSeq DNA NM_177343

Description calcium/calmodulin-dependent protein kinase ID
Experiment help page p-Value q-Value period phase
JTK 7.64e-11 1.15e-08 25.0 2.5
Lomb Scargle 1.19e-06 0.000270606 24.836 10.37
DeLichtenberg 0.0057 0.568452 24.0 NA
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CIRCA