CIRCA

NEWS (6/9/2014): We added two new datasets: "Mouse Macrophages" and "Mouse Heart LD"

(Examples 1451371_at 1422470_at gnf1m00037_a_at or Arntl or kinase inhibitor )
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Experiment help page
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1424969_s_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_029692

Probeset 1424969_s_at

Links Wikipedia HomoloGene

Symbol Upp2

Unigene Mm.200370

RefSeq Protein NP_083968

RefSeq DNA NM_029692

Description uridine phosphorylase 2
Experiment help page p-Value q-Value period phase
JTK 8.53e-12 1.69e-09 24.0 12.0
Lomb Scargle 9.42e-07 0.000244167 23.525 18.14
DeLichtenberg 0.007 0.568452 24.0 NA
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1435859_x_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_011188

Probeset 1435859_x_at

Links Wikipedia HomoloGene

Symbol Psmc2

Unigene Mm.2462

RefSeq Protein NP_035318

RefSeq DNA NM_011188

Description proteasome (prosome, macropain) 26S subunit, ATPase 2
Experiment help page p-Value q-Value period phase
JTK 8.53e-12 1.69e-09 23.0 4.0
Lomb Scargle 2.43e-06 0.000414397 23.118 10.13
DeLichtenberg 0.8545 1.0 24.0 NA
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1436200_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_028894

Probeset 1436200_at

Links Wikipedia HomoloGene

Symbol Lonrf3

Unigene Mm.327654

RefSeq Protein NP_083170

RefSeq DNA NM_028894

Description LON peptidase N-terminal domain and ring finger 3
Experiment help page p-Value q-Value period phase
JTK 8.53e-12 1.69e-09 24.3333 18.8333
Lomb Scargle 2.36e-06 0.000412552 23.118 0.55
DeLichtenberg 0.001 0.249177 24.0 NA
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1449067_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_031197

Probeset 1449067_at

Links Wikipedia HomoloGene

Symbol Slc2a2

Unigene Mm.18443

RefSeq Protein NP_112474

RefSeq DNA NM_031197

Description solute carrier family 2 (facilitated glucose transporter), member 2
Experiment help page p-Value q-Value period phase
JTK 8.53e-12 1.69e-09 23.0 11.5
Lomb Scargle 2.13e-06 0.00038273 22.345 18.17
DeLichtenberg 0.2784 1.0 24.0 NA
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1450245_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_011388

Probeset 1450245_at

Links Wikipedia HomoloGene

Symbol Slc10a2

Unigene Mm.3500

RefSeq Protein NP_035518

RefSeq DNA NM_011388

Description solute carrier family 10, member 2
Experiment help page p-Value q-Value period phase
JTK 8.53e-12 1.69e-09 24.0 19.0
Lomb Scargle 1.7e-05 0.00130055 24.383 0.98
DeLichtenberg 0.0095 0.568452 24.0 NA
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1417311_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_024223

Probeset 1417311_at

Links Wikipedia HomoloGene

Symbol Crip2

Unigene Mm.133825

RefSeq Protein NP_077185

RefSeq DNA NM_024223

Description cysteine rich protein 2
Experiment help page p-Value q-Value period phase
JTK 1.05e-11 2.02e-09 25.0 23.5
Lomb Scargle 4.22e-07 0.000161075 25.306 6.04
DeLichtenberg 0.0196 0.568452 24.0 NA
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1423462_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_138667

Probeset 1423462_at

Links Wikipedia HomoloGene

Symbol Tab2

Unigene Mm.193041

RefSeq Protein NP_619608

RefSeq DNA NM_138667

Description TGF-beta activated kinase 1/MAP3K7 binding protein 2
Experiment help page p-Value q-Value period phase
JTK 1.05e-11 2.02e-09 24.0 2.0
Lomb Scargle 1.2e-06 0.000270606 24.383 8.78
DeLichtenberg 0.0343 0.568452 24.0 NA
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1416362_a_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_010219

Probeset 1416362_a_at

Links Wikipedia HomoloGene

Symbol Fkbp4

Unigene Mm.12758

RefSeq Protein NP_034349

RefSeq DNA NM_010219

Description FK506 binding protein 4
Experiment help page p-Value q-Value period phase
JTK 1.05e-11 2.02e-09 25.0 18.5
Lomb Scargle 1.27e-06 0.000279406 24.383 1.39
DeLichtenberg 0.0736 0.655755 24.0 NA
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1455240_x_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_XM_982175

Probeset 1455240_x_at

Links Wikipedia HomoloGene

Symbol Gm7969

Unigene Mm.425830

RefSeq Protein XP_987269

RefSeq DNA XM_982175

Description predicted gene 7969
Experiment help page p-Value q-Value period phase
JTK 1.05e-11 2.02e-09 24.0 22.5
Lomb Scargle 1.26e-06 0.000278565 24.383 6.2
DeLichtenberg 0.0215 0.568452 24.0 NA
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1418300_a_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_021462

Probeset 1418300_a_at

Links Wikipedia HomoloGene

Symbol Mknk2

Unigene Mm.42126

RefSeq Protein NP_067437

RefSeq DNA NM_021462

Description MAP kinase-interacting serine/threonine kinase 2
Experiment help page p-Value q-Value period phase
JTK 1.05e-11 2.02e-09 22.0 12.5
Lomb Scargle 2.11e-06 0.00038273 21.978 18.43
DeLichtenberg 0.0241 0.568452 24.0 NA
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1438195_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_175380

Probeset 1438195_at

Links Wikipedia HomoloGene

Symbol Gpd1l

Unigene Mm.38198

RefSeq Protein NP_780589

RefSeq DNA NM_175380

Description glycerol-3-phosphate dehydrogenase 1-like
Experiment help page p-Value q-Value period phase
JTK 1.05e-11 2.02e-09 23.0 12.5
Lomb Scargle 7.84e-06 0.00081099 22.725 19.0
DeLichtenberg 0.2528 1.0 24.0 NA
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1438404_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_001081977
RNAseq_NM_080563

Probeset 1438404_at

Links Wikipedia HomoloGene

Symbol Rnf144a

Unigene Mm.214932

RefSeq Protein NP_001075446   NP_542130

RefSeq DNA NM_001081977
NM_080563

Description ring finger protein 144A
Experiment help page p-Value q-Value period phase
JTK 1.17e-11 2.24e-09 25.0 23.5
Lomb Scargle 1.13e-05 0.00102133 24.383 6.05
DeLichtenberg 0.0073 0.568452 24.0 NA
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1422780_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_021534

Probeset 1422780_at

Links Wikipedia HomoloGene

Symbol Pxmp4

Unigene Mm.24673

RefSeq Protein NP_067509

RefSeq DNA NM_021534

Description peroxisomal membrane protein 4
Experiment help page p-Value q-Value period phase
JTK 1.29e-11 2.44e-09 25.5 22.5
Lomb Scargle 4.95e-07 0.000177938 24.836 5.85
DeLichtenberg 0.0223 0.568452 24.0 NA
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1438917_x_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_053074

Probeset 1438917_x_at

Links Wikipedia HomoloGene

Symbol Nup62

Unigene None

RefSeq Protein NP_444304

RefSeq DNA NM_053074

Description nucleoporin 62
Experiment help page p-Value q-Value period phase
JTK 1.29e-11 2.44e-09 26.0 18.0
Lomb Scargle 9.8e-06 0.00092944 25.306 1.03
DeLichtenberg 0.0897 0.703504 24.0 NA
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1426516_a_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_001130412
RNAseq_NM_015763
RNAseq_NM_172950

Probeset 1426516_a_at

Links Wikipedia HomoloGene

Symbol Lpin1

Unigene Mm.153625

RefSeq Protein NP_001123884   NP_056578   NP_766538

RefSeq DNA NM_001130412
NM_015763
NM_172950

Description lipin 1
Experiment help page p-Value q-Value period phase
JTK 1.29e-11 2.44e-09 23.0 13.0
Lomb Scargle 0.00019 0.00638539 22.725 18.28
DeLichtenberg 0.0001 0.0437874 24.0 NA
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1424842_a_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_029270
RNAseq_NM_146161

Probeset 1424842_a_at

Links Wikipedia HomoloGene

Symbol Arhgap24

Unigene Mm.440191

RefSeq Protein NP_083546   NP_666273

RefSeq DNA NM_029270
NM_146161

Description Rho GTPase activating protein 24
Experiment help page p-Value q-Value period phase
JTK 1.57e-11 2.87e-09 26.0 23.0
Lomb Scargle 3.37e-07 0.000150486 25.794 7.16
DeLichtenberg 0.0221 0.568452 24.0 NA
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1437080_s_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_178616

Probeset 1437080_s_at

Links Wikipedia HomoloGene

Symbol Psmd11

Unigene Mm.260539

RefSeq Protein NP_848731

RefSeq DNA NM_178616

Description proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
Experiment help page p-Value q-Value period phase
JTK 1.57e-11 2.87e-09 25.3333 2.33333
Lomb Scargle 1.15e-06 0.000268737 25.306 10.07
DeLichtenberg 0.3345 1.0 24.0 NA
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1416418_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_020590

Probeset 1416418_at

Links Wikipedia HomoloGene

Symbol Gabarapl1

Unigene Mm.14638

RefSeq Protein NP_065615

RefSeq DNA NM_020590

Description gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
Experiment help page p-Value q-Value period phase
JTK 1.57e-11 2.87e-09 24.0 6.25
Lomb Scargle 1.92e-06 0.000366923 23.525 12.89
DeLichtenberg 0.024 0.568452 24.0 NA
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1459679_s_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_001161817
RNAseq_NM_010863

Probeset 1459679_s_at

Links Wikipedia HomoloGene

Symbol Myo1b

Unigene Mm.3390

RefSeq Protein NP_001155289   NP_034993

RefSeq DNA NM_001161817
NM_010863

Description myosin IB
Experiment help page p-Value q-Value period phase
JTK 1.57e-11 2.87e-09 25.0 1.0
Lomb Scargle 2.12e-06 0.00038273 24.383 7.29
DeLichtenberg 0.3346 1.0 24.0 NA
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1442277_at Data
Experiment Mouse Liver 48 hour Hughes 2009 (Affymetrix)

UCSC RNAseq RNAseq_NM_001025566
RNAseq_NM_013490

Probeset 1442277_at

Links Wikipedia HomoloGene

Symbol Chka

Unigene Mm.225505

RefSeq Protein NP_001020737   NP_038518

RefSeq DNA NM_001025566
NM_013490

Description choline kinase alpha
Experiment help page p-Value q-Value period phase
JTK 1.57e-11 2.87e-09 24.0 22.5
Lomb Scargle 2.46e-06 0.000414397 24.383 5.92
DeLichtenberg 0.0 0.0 24.0 NA
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CIRCA